Award Abstract # 2148731
Collaborative Research: RUI: Molecular Sentinels: Secondary Metabolites as Indicators of Environmental Change in an Antarctic Polar Desert

NSF Org: OPP
Office of Polar Programs (OPP)
Recipient: THE TRUSTEES OF THE SMITH COLLEGE
Initial Amendment Date: August 31, 2022
Latest Amendment Date: August 31, 2022
Award Number: 2148731
Award Instrument: Standard Grant
Program Manager: William Ambrose
wambrose@nsf.gov
 (703)292-8048
OPP
 Office of Polar Programs (OPP)
GEO
 Directorate for Geosciences
Start Date: September 15, 2022
End Date: August 31, 2025 (Estimated)
Total Intended Award Amount: $89,000.00
Total Awarded Amount to Date: $89,000.00
Funds Obligated to Date: FY 2022 = $89,000.00
History of Investigator:
  • Lesley-Ann Giddings (Principal Investigator)
    lgiddings@smith.edu
Recipient Sponsored Research Office: Smith College
10 ELM ST
NORTHAMPTON
MA  US  01063-6304
(413)584-2700
Sponsor Congressional District: 02
Primary Place of Performance: Smith College
10 ELM STREET
Northampton
MA  US  01063-6304
Primary Place of Performance
Congressional District:
02
Unique Entity Identifier (UEI): KRDJLRA9X6F3
Parent UEI:
NSF Program(s): ANT Earth Sciences
Primary Program Source: 0100CYXXDB NSF RESEARCH & RELATED ACTIVIT
Program Reference Code(s): 9102, 9229, 5294
Program Element Code(s): 511200
Award Agency Code: 4900
Fund Agency Code: 4900
Assistance Listing Number(s): 47.078

ABSTRACT

Antarctica habitats are unlike any others found on the planet with extreme combined variations in cold, salinity, moisture content and light availability. Soils and sediments from the Antarctic McMurdo Dry Valley?s region harbor unique microorganisms that can cope with the unique combination of extreme conditions, but specifically how extremophile microbes function or respond to change in these extreme habitats is still largely unknown. This team is utilizing previously collected Antarctic McMurdo Dry Valleys (MDV) samples to evaluate differences in microbial extremophile function in response to changes in strong salinity gradients caused by warming temperatures. Comparative analyses of gene expression patterns and secondary metabolite production are being undertaken in lab-based microcosm studies with varying salinities. This work is helping to elucidate the genetic underpinnings for life in Antarctica and show how Antarctic biota evolve and adapt to a changing environment.

Specifically, the work is showing how environmentally relevant changes in salinity will induce differential expression of secondary metabolites in isolates previously collected from the hypersaline Don Juan Pond in the western end of Wright Valley, Victoria Land in the Dry Valleys region. Transcriptomes of cell cultures under varying salinities are being sequenced and compared to determine significant changes to cellular metabolism, particularly secondary metabolic pathways. Additional previously collected sample types (soils, glacier ice, sediments, and brines) collected from a range of salinities are being used to refine methodologies for future field work and provide training opportunities for students. This program includes a variety of other broader impacts. This project is led by two female PIs, one of whom is a faculty of color, which will broaden the participation of Black women and girls in Antarctic Science. Women and people of color are still underrepresented in science, technology, engineering and math (STEM) fields, especially in the Geosciences. The program is also designed to provide strong opportunities to integrate STEM research with undergraduate education, especially at Smith College, a predominantly undergraduate women?s institution. At least one graduate student and 4 undergraduates will be involved in the project, and some will participate in presenting results at international meetings. The program is also developing related curriculum in partnership with education specialists to be used with middle school students.

This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.

PUBLICATIONS PRODUCED AS A RESULT OF THIS RESEARCH

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Shaffer, Jacob M. and Giddings, Lesley-Ann and Samples, Robert M. and Mikucki, Jill A. "Genomic and phenotypic characterization of a red-pigmented strain of Massilia frigida isolated from an Antarctic microbial mat" Frontiers in Microbiology , v.14 , 2023 https://doi.org/10.3389/fmicb.2023.1156033 Citation Details
Samples, Robert and Mukoyama, Riko and Shaffer, Jacob and Mikucki, Jill and Giddings, Lesley-Ann "OpenASAP: An affordable 3D printed atmospheric solids analysis probe (ASAP) mass spectrometry system for direct analysis of solid and liquid samples" HardwareX , v.16 , 2023 https://doi.org/10.1016/j.ohx.2023.e00490 Citation Details

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