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Award Abstract # 2014566
Collaborative Research: Speciation in laboratory populations of bacteriophage T7

NSF Org: DEB
Division Of Environmental Biology
Recipient: UNIVERSITY OF HOUSTON SYSTEM
Initial Amendment Date: June 9, 2020
Latest Amendment Date: February 21, 2025
Award Number: 2014566
Award Instrument: Standard Grant
Program Manager: Leslie J. Rissler
lrissler@nsf.gov
 (703)292-4628
DEB
 Division Of Environmental Biology
BIO
 Directorate for Biological Sciences
Start Date: June 15, 2020
End Date: May 31, 2026 (Estimated)
Total Intended Award Amount: $559,941.00
Total Awarded Amount to Date: $559,941.00
Funds Obligated to Date: FY 2020 = $559,941.00
History of Investigator:
  • Ricardo Azevedo (Principal Investigator)
    razevedo@uh.edu
Recipient Sponsored Research Office: University of Houston
4300 MARTIN LUTHER KING BLVD
HOUSTON
TX  US  77204-3067
(713)743-5773
Sponsor Congressional District: 18
Primary Place of Performance: University of Houston
Houston
TX  US  77204-5001
Primary Place of Performance
Congressional District:
18
Unique Entity Identifier (UEI): QKWEF8XLMTT3
Parent UEI:
NSF Program(s): Evolutionary Processes
Primary Program Source: 01002021DB NSF RESEARCH & RELATED ACTIVIT
Program Reference Code(s):
Program Element Code(s): 112700
Award Agency Code: 4900
Fund Agency Code: 4900
Assistance Listing Number(s): 47.074

ABSTRACT

This research will advance our understanding of how evolutionary changes happening within populations (microevolution) drive the accumulation of genetic barriers to reproduction between populations, eventually resulting in the origin of new species (macroevolution). Although it is well established that differences in the environment experienced by diverging populations can result in different adaptations that are not compatible in the hybrid offspring of divergent parents, only a few evolution experiments have shown that the same can happen in populations evolving in identical environments. The aim of this research is to develop mathematical models for predicting the rate at which incompatible adaptations accumulate between populations evolving in identical environments, and to test the predictions using laboratory evolution experiments. The project will build on a 14-year collaboration between the researchers (Burch and Azevedo) that has used a combination of computational and laboratory evolution experiments to investigate the causes and consequences of interactions between genes. In addition, the project will capitalize on the connections that the researchers have already formed with Latino organizations and dual-language primary schools in and around Chapel Hill and Houston to build teams of primarily Latino students. The researchers will mentor the student teams to develop games and activities to teach basic concepts in coding, mathematical modeling, microbiology, and evolution, that the teams will then deliver, in English and Spanish, to classrooms and science expos in these communities. The goal is for the students to become teachers over the course of this outreach project.

The project will use computational and laboratory evolution experiments to investigate the initial stages of speciation, from the accumulation of the very first incompatible adaptations. The central goals will be to determine, experimentally, whether adaptation often results in the accumulation of functionally interacting mutations that, over time, make it difficult for diverging populations to produce viable hybrid offspring. Computer simulations and mathematical models will be used to develop quantitative predictions that will then be tested using laboratory evolution experiments. The researchers will: 1) monitor the evolution of replicate populations of the bacteriophage T7 evolving in identical laboratory environments; 2) generate hybrid offspring between pairs of these evolving populations and monitor the accumulation of mutations that increase fitness in one of the parental populations, but decrease fitness in their hybrid offspring, 3) measure the rate at which such incompatible adaptations accumulate, and 4) determine whether the identified incompatible adaptations resulted from the kinds of functional interactions that the researchers? mathematical models predict to be likely.

This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.

PUBLICATIONS PRODUCED AS A RESULT OF THIS RESEARCH

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Kalirad, Ata and Burch, Christina and Azevedo, Ricardo "Genetic drift promotes and recombination hinders speciation on holey fitness landscapes" PLOS Genetics , v.20 , 2024 https://doi.org/10.1371/journal.pgen.1011126 Citation Details
Olofsson, Peter and Chipkin, Logan and Daileda, Ryan C. and Azevedo, Ricardo B. "Mutational meltdown in asexual populations doomed to extinction" Journal of Mathematical Biology , v.87 , 2023 https://doi.org/10.1007/s00285-023-02019-y Citation Details
Azevedo, Ricardo B.R. and Olofsson, Peter "A branching process model of evolutionary rescue" Mathematical Biosciences , v.341 , 2021 https://doi.org/10.1016/j.mbs.2021.108708 Citation Details
Tarkington, Jason and Zhang, Hao and Azevedo, Ricardo B. R. and Zufall, Rebecca A. "Sex, amitosis, and evolvability in the ciliate Tetrahymena thermophila" Evolution , v.77 , 2022 https://doi.org/10.1093/evolut/qpac031 Citation Details

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