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Award Abstract # 1928514
Linking evolutionary processes and taxonomy in the peatmoss group Sphagnum subg. Cuspidata

NSF Org: DEB
Division Of Environmental Biology
Recipient: DUKE UNIVERSITY
Initial Amendment Date: June 18, 2019
Latest Amendment Date: March 11, 2020
Award Number: 1928514
Award Instrument: Standard Grant
Program Manager: Christopher Balakrishnan
cbalakri@nsf.gov
 (703)292-2331
DEB
 Division Of Environmental Biology
BIO
 Directorate for Biological Sciences
Start Date: January 1, 2020
End Date: September 30, 2024 (Estimated)
Total Intended Award Amount: $819,999.00
Total Awarded Amount to Date: $851,441.00
Funds Obligated to Date: FY 2019 = $819,999.00
FY 2020 = $31,442.00
History of Investigator:
  • Arthur Shaw (Principal Investigator)
    shaw@duke.edu
Recipient Sponsored Research Office: Duke University
2200 W MAIN ST
DURHAM
NC  US  27705-4640
(919)684-3030
Sponsor Congressional District: 04
Primary Place of Performance: Duke University
2200 W. Main St, Suite 710
Durham
NC  US  27705-4010
Primary Place of Performance
Congressional District:
04
Unique Entity Identifier (UEI): TP7EK8DZV6N5
Parent UEI:
NSF Program(s): Systematics & Biodiversity Sci
Primary Program Source: 01002021DB NSF RESEARCH & RELATED ACTIVIT
01001920DB NSF RESEARCH & RELATED ACTIVIT
Program Reference Code(s): 9251, 9232, 9178
Program Element Code(s): 737400
Award Agency Code: 4900
Fund Agency Code: 4900
Assistance Listing Number(s): 47.074

ABSTRACT

Peatmosses (genus Sphagnum) cover huge areas of the Northern Hemisphere where they help regulate regional patterns of water drainage, and in the far North, the extent of permafrost (permanently frozen ground). Within these Sphagnum-dominated peatland ecosystems, peatmosses store vast amounts of carbon in the form of partially decomposed peat and create environments for unique assemblages of other plants, animals, and microbes. There are an estimated 250-400 peatmoss species although the exact number of species and their genealogical relationships remain to be tested. This project focuses on species delimitation, estimating genealogical relationships, and producing a new taxonomic classification for one group of peatmosses: Sphagnum subg. Cuspidata. Undergraduates, graduate students and post-doctoral researchers will be trained in diverse field and laboratory techniques and receive hands-on experience working in Sphagnum-dominated peatland ecosystems. A series of workshops and field courses will engage both professional and amateur naturalists in the project, and a new illustrated book will introduce preschool children to the diversity of plant life. All DNA sequence data generated by the project will be deposited in public databases and other research products will be freely accessible.

The central aims of this project are to assess species delimitation, phylogenetic relationships, interspecific admixture, and inter- / intra-specific genome structure in Sphagnum, subgenus Cuspidata. Subgenus Cuspidata includes approximately 20-25 species. The project covers a broad range of geographic scales including proximate populations, regional metapopulations, and plants from different continents, and includes three integrated parts. The first aim uses RADSeq to test hypotheses of phylogeographic structure among plants collected in Europe, eastern North America, western North America, Asia, and specifically, whether eastern North American and European plants form a clade sister to plants from western North America and Asia. The RADSeq data will be used to delimit phylogenetic species, including estimates of genetic admixture among species and intraspecific, geographic metapopulation systems. The second aim uses whole genome sequencing to test hypotheses about genomic differentiation among species and geographically disjunct population systems, as well as genomic regions that are shared among species- and population-level clades. A major goal is to assess the physical architecture of shared and differentiated genomic regions across the 19 chromosomes of haploid gametophytes. Comparative analyses will test hypotheses that species differ in genes related to nutrient requirements and water relations, two important niche gradients that differentiate members of Sphagnum subg. Cuspidata. The comparative analyses are facilitated by rich genomic resources available for Sphagnum, including a reference genome and genetic map for a species in subg. Cuspidata (S. fallax). The third and final aim integrates and synthesizes data within a taxonomic revision of the subgenus, including identification keys, descriptions, nomenclatural revisions, illustrations, and distribution maps.

This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.

PUBLICATIONS PRODUCED AS A RESULT OF THIS RESEARCH

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Nieto-Lugilde, M. and Robinson, S. and Aguero, B. and Duffy, A. and Imwattana, K. and Hassel, K.. and Flatberg, K.I. and Stenøien, H.K. and Shkurko, A.V. and Vladimir E. and Fedosov, V.E. and Shaw, A.J. "Morphological-molecular incongruence in Sphagnum majus ssp. majus and ssp. norvegicum." The Bryologist , v.125 , 2022 Citation Details
Wieczynski, Daniel J and Yoshimura, Kristin M and Denison, Elizabeth R and Geisen, Stefan and DeBruyn, Jennifer M and Shaw, A Jonathan and Weston, David J and Pelletier, Dale A and Wilhelm, Steven W and Gibert, Jean P "Viral infections likely mediate microbial controls on ecosystem responses to global warming" FEMS Microbiology Ecology , v.99 , 2023 https://doi.org/10.1093/femsec/fiad016 Citation Details
Robinson, Sean C and Nieto-Lugilde, Marta and Duffy, Aaron M and Martinez_Muñoz, Katherine and Aguero, Blanka and Merced, Amelia and Hassel, Kristian and Flatberg, Kjell Ivar and Shaw, A Jonathan "The Sphagnum cuspidatum complex: phylogeny, species delimitation, and morphology" Biological Journal of the Linnean Society , v.141 , 2023 https://doi.org/10.1093/biolinnean/blad111 Citation Details
NietoLugilde, Marta and NietoLugilde, Diego and Piatkowski, Bryan and Duffy, Aaron M and Robinson, Sean C and Aguero, Blanka and Schuette, Scott and Wilkens, Richard and Yavitt, Joseph and Shaw, A Jonathan "Ecological differentiation and sympatry of cryptic species in the Sphagnum magellanicum complex (Bryophyta)" American Journal of Botany , v.111 , 2024 https://doi.org/10.1002/ajb2.16401 Citation Details
Imwattana, Karn and Aguero, Blanka and Duffy, Aaron and Shaw, A. Jonathan "Demographic history and gene flow in the peatmosses Sphagnum recurvum and Sphagnum flexuosum (Bryophyta: Sphagnaceae)" Ecology and Evolution , v.12 , 2022 https://doi.org/10.1002/ece3.9489 Citation Details
Healey, Adam L. and Piatkowski, Bryan and Lovell, John T. and Sreedasyam, Avinash and Carey, Sarah B. and Mamidi, Sujan and Shu, Shengqiang and Plott, Chris and Jenkins, Jerry and Lawrence, Travis and Aguero, Blanka and Carrell, Alyssa A. and Nieto-Lugild "Newly identified sex chromosomes in the Sphagnum (peat moss) genome alter carbon sequestration and ecosystem dynamics" Nature Plants , v.9 , 2023 https://doi.org/10.1038/s41477-022-01333-5 Citation Details
Duffy, Aaron M. and Aguero, Blanka and Stenøien, Hans K. and Flatberg, Kjell Ivar and Ignatov, Michael S. and Hassel, Kristian and Shaw, A. Jonathan "Phylogenetic structure in the Sphagnum recurvum complex (Bryophyta) in relation to taxonomy and geography" American Journal of Botany , v.107 , 2020 https://doi.org/10.1002/ajb2.1525 Citation Details

PROJECT OUTCOMES REPORT

Disclaimer

This Project Outcomes Report for the General Public is displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed in this Report are those of the PI and do not necessarily reflect the views of the National Science Foundation; NSF has not approved or endorsed its content.

The goals of this project were to assess the genetic structure of peatmoss (Sphagnum) species and use that information to develop a revised classification for the group.  Peatmosses are among the most ecologically important plants on earth because Sphagnum-dominated peatlands cover vast areas of earth's land surface, provide habitats for a broad variety of plants, animals, and microbes, control water patterns across the land surface (and reduce the impacts of flooding), and store almost 1/3 of the world’s carbon, with measurable importance to earth’s climate.  We used a combination of field work, morphological study in the laboratory, and DNA sequencing of collections made in the field. Our results led to a revised classification for this group of peatmosses.  In several cases we showed that traditionally recognized species are not distinct, and in other cases we discovered unrecognized biodiversity.  Previous research has shown that each peatmoss species has unique ecological characteristics so it is important to have an accurate classification for those species. The project also supported educational training of students and post-doctoral researchers.  Participants in the project included academic faculty, undergraduate students, graduate students, and citizen scienitist.  We offered several workshops targeting amateurs who wished to learn more about this important and fascinating group.  We published a series of scientific papers describing our results.


Last Modified: 03/26/2025
Modified by: Arthur Jonathan Shaw

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