Award Abstract # 1848576
Convergence: RAISE: Linking the adaptive dynamics of plankton with emergent global ocean biogeochemistry

NSF Org: OCE
Division Of Ocean Sciences
Recipient: UNIVERSITY OF CALIFORNIA IRVINE
Initial Amendment Date: September 10, 2018
Latest Amendment Date: August 23, 2019
Award Number: 1848576
Award Instrument: Continuing Grant
Program Manager: Cynthia Suchman
csuchman@nsf.gov
 (703)292-2092
OCE
 Division Of Ocean Sciences
GEO
 Directorate for Geosciences
Start Date: September 15, 2018
End Date: August 31, 2022 (Estimated)
Total Intended Award Amount: $999,038.00
Total Awarded Amount to Date: $999,038.00
Funds Obligated to Date: FY 2018 = $899,182.00
FY 2019 = $99,856.00
History of Investigator:
  • Adam Martiny (Principal Investigator)
    amartiny@uci.edu
  • Simon Levin (Co-Principal Investigator)
  • Francois Primeau (Co-Principal Investigator)
  • Natalia Komarova (Co-Principal Investigator)
Recipient Sponsored Research Office: University of California-Irvine
160 ALDRICH HALL
IRVINE
CA  US  92697-0001
(949)824-7295
Sponsor Congressional District: 47
Primary Place of Performance: University of California-Irvine
3208 Croul Hall
Irvine
CA  US  92697-3100
Primary Place of Performance
Congressional District:
47
Unique Entity Identifier (UEI): MJC5FCYQTPE6
Parent UEI: MJC5FCYQTPE6
NSF Program(s): GCR-Growing Convergence Resear,
Program Planning and Policy De,
BIOLOGICAL OCEANOGRAPHY,
Cross-BIO Activities,
MSPA-INTERDISCIPLINARY,
Integrat & Collab Ed & Rsearch
Primary Program Source: 01001819DB NSF RESEARCH & RELATED ACTIVIT
01001920DB NSF RESEARCH & RELATED ACTIVIT
Program Reference Code(s): 9117, 8811, 1650, 1389, 4444, 7657, 7454, 049Z
Program Element Code(s): 062Y00, 066Y00, 165000, 727500, 745400, 769900
Award Agency Code: 4900
Fund Agency Code: 4900
Assistance Listing Number(s): 47.050

ABSTRACT

Due to their sheer abundance and high activity, microorganisms have the potential to greatly influence how ecosystems are affected by changes in their environment. However, descriptions of microbial physiology and diversity are local and highly complex and thus rarely considered in Earth System Models. Thus, the researchers focus on a convergence research framework that can qualitatively and quantitatively integrate eco-evolutionary changes in microorganisms with global biogeochemistry. Here, the investigators will develop an approach that integrates the knowledge and tools of biologists, mathematicians, engineers, and geoscientists to understand the link between the ocean nutrient and carbon cycles. The integration of data and knowledge from diverse fields will provide a robust, biologically rich, and computationally efficient prediction for the variation in plankton resource requirements and the biogeochemical implications, addressing a fundamental challenge in ocean science. In addition, the project can serve as a road map for many other research groups facing a similar lack of convergence between biology and geoscience.

Traditionally, the cellular elemental ratios of Carbon, Nitrogen, and Phosphorus (C:N:P) of marine communities have been considered static at Redfield proportions but recent studies have demonstrated strong latitudinal variation. Such regional variation may have large - but poorly constrained - implications for marine biodiversity, biogeochemical functioning, and atmospheric carbon dioxide levels. As such, variations in ocean community C:N:P may represent an important biological feedback. Here, the investigators propose a convergence research framework integrating cellular and ecological processes controlling microbial resource allocations with an Earth System model. The approach combines culture experiments and omics measurements to provide a molecular understanding of cellular resource allocations. Using a mathematical framework of increasing complexity describing communicating, moving demes, the team will quantify the extent to which local mixing, environmental heterogeneity and evolution lead to systematic deviations in plankton resource allocations and C:N:P. Optimization tools from engineering science will be used to facilitate the quantitative integration of models and observations across a range of scales and complexity levels. Finally, global ocean modeling will enable understanding of how plankton resource use impacts Earth System processes. By integrating data and knowledge across fields, scales and complexity, the investigators will develop a robust link between variation in plankton C:N:P and global biogeochemical cycles.

This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.

PUBLICATIONS PRODUCED AS A RESULT OF THIS RESEARCH

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(Showing: 1 - 10 of 28)
Baer, Steven E. and Rauschenberg, Sara and Garcia, Catherine A. and Garcia, Nathan S. and Martiny, Adam C. and Twining, Benjamin S. and Lomas, Michael W. "Carbon and nitrogen productivity during spring in the oligotrophic Indian Ocean along the GO-SHIP IO9N transect" Deep Sea Research Part II: Topical Studies in Oceanography , v.161 , 2019 10.1016/j.dsr2.2018.11.008 Citation Details
Brumley, Douglas R. and Carrara, Francesco and Hein, Andrew M. and Hagstrom, George I. and Levin, Simon A. and Stocker, Roman "Cutting Through the Noise: Bacterial Chemotaxis in Marine Microenvironments" Frontiers in Marine Science , v.7 , 2020 10.3389/fmars.2020.00527 Citation Details
Clayton, Sophie and Alexander, Harriet and Graff, Jason R. and Poulton, Nicole J. and Thompson, Luke R. and Benway, Heather and Boss, Emmanuel and Martiny, Adam "Bio-GO-SHIP: The Time Is Right to Establish Global Repeat Sections of Ocean Biology" Frontiers in Marine Science , v.8 , 2022 https://doi.org/10.3389/fmars.2021.767443 Citation Details
Fagan, Adam J. and Moreno, Allison R. and Martiny, Adam C. "Role of ENSO Conditions on Particulate Organic Matter Concentrations and Elemental Ratios in the Southern California Bight" Frontiers in Marine Science , v.6 , 2019 10.3389/fmars.2019.00386 Citation Details
Flombaum, Pedro and Martiny, Adam C. "Diverse but uncertain responses of picophytoplankton lineages to future climate change" Limnology and Oceanography , v.66 , 2021 https://doi.org/10.1002/lno.11951 Citation Details
Flombaum, Pedro and Wang, Wei-Lei and Primeau, Francois W. and Martiny, Adam C. "Global picophytoplankton niche partitioning predicts overall positive response to ocean warming" Nature Geoscience , v.13 , 2020 10.1038/s41561-019-0524-2 Citation Details
Garcia, Catherine A. and Hagstrom, George I. and Larkin, Alyse A. and Ustick, Lucas J. and Levin, Simon A. and Lomas, Michael W. and Martiny, Adam C. "Linking regional shifts in microbial genome adaptation with surface ocean biogeochemistry" Philosophical Transactions of the Royal Society B: Biological Sciences , v.375 , 2020 https://doi.org/10.1098/rstb.2019.0254 Citation Details
Garcia, Nathan S. and Talmy, David and Fu, WeiWei and Larkin, Alyse A. and Lee, Jenna and Martiny, Adam C. "The Diel Cycle of Surface Ocean Elemental Stoichiometry has Implications for Ocean Productivity" Global Biogeochemical Cycles , v.36 , 2022 https://doi.org/10.1029/2021GB007092 Citation Details
Larkin, Alyse A. and Garcia, Catherine A. and Garcia, Nathan and Brock, Melissa L. and Lee, Jenna A. and Ustick, Lucas J. and Barbero, Leticia and Carter, Brendan R. and Sonnerup, Rolf E. and Talley, Lynne D. and Tarran, Glen A. and Volkov, Denis L. and M "High spatial resolution global ocean metagenomes from Bio-GO-SHIP repeat hydrography transects" Scientific Data , v.8 , 2021 https://doi.org/10.1038/s41597-021-00889-9 Citation Details
Larkin, Alyse A. and Hagstrom, George I. and Brock, Melissa L. and Garcia, Nathan S. and Martiny, Adam C. "Basin-scale biogeography of Prochlorococcus and SAR11 ecotype replication" The ISME Journal , v.17 , 2022 https://doi.org/10.1038/s41396-022-01332-6 Citation Details
Larkin, Alyse A. and Moreno, Allison R. and Fagan, Adam J. and Fowlds, Alyssa and Ruiz, Alani and Martiny, Adam C. "Persistent El Niño driven shifts in marine cyanobacteria populations" PLOS ONE , v.15 , 2020 https://doi.org/10.1371/journal.pone.0238405 Citation Details
(Showing: 1 - 10 of 28)

PROJECT OUTCOMES REPORT

Disclaimer

This Project Outcomes Report for the General Public is displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed in this Report are those of the PI and do not necessarily reflect the views of the National Science Foundation; NSF has not approved or endorsed its content.

The aim of this project was to combine genomics and new mathematical approaches to understand the role of plankton biodiversity in ocean carbon and nutrient cycles. The project resulted in several transformative discoveries. Marine microorganisms rapidly adapt to changes in the environment. We sequenced the microbiomes from many regions and used such adaptive genomic mutations as a biosensor for ocean environmental changes. This approach provided the first global description of phytoplankton nutrient limitation. We next integrated these ‘omics field observations with measurements of ecosystem carbon and nutrient stocks. Traditionally, the elemental composition of marine communities has been considered static at Redfield proportions. However, our project clearly demonstrated regional variation in the carbon:nitrogen:phosphorus ratios linked to plankton nutrient limitation. Finally, we integrated ‘omics and biogeochemical measurements with a new generation of Earth system models to quantify how plankton physiology and adaptation regulation ocean biogeochemical cycles. This resulted in a new understanding of both marine nitrogen fixation and carbon sequestration. Thus, we demonstrated how adaptative resource in marine ecosystems can have large implications for marine biodiversity, biogeochemical functioning, and atmospheric  levels. As such, future variations in ocean community C:N:P may represent one of the most important biological feedbacks to climate change.

 

The project several broader impacts. First, we demonstrated the importance of convergent science approach for understanding the importance of biological responses for the global carbon and nutrient cycles. The project showed how to integrate molecular processes controlling microbial resource allocations with a global Earth System model. Second, we trained a large undergraduate and graduate student cohort in convergent science approaches. Students also had the opportunity to learn diverse skills across disciplines. As a result, many of the most impactful studies were student-led.


Last Modified: 12/05/2022
Modified by: Adam C Martiny

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