Award Abstract # 1753851
Collaborative Research: SG: Genomic and functional tests of mitochondrial-nuclear coevolution

NSF Org: DEB
Division Of Environmental Biology
Recipient: THE UNIVERSITY OF IOWA
Initial Amendment Date: March 3, 2018
Latest Amendment Date: June 24, 2021
Award Number: 1753851
Award Instrument: Standard Grant
Program Manager: Samuel Scheiner
DEB
 Division Of Environmental Biology
BIO
 Directorate for Biological Sciences
Start Date: July 1, 2018
End Date: June 30, 2023 (Estimated)
Total Intended Award Amount: $99,999.00
Total Awarded Amount to Date: $180,152.00
Funds Obligated to Date: FY 2018 = $99,999.00
FY 2021 = $80,153.00
History of Investigator:
  • Maurine Neiman (Principal Investigator)
    maurine-neiman@uiowa.edu
Recipient Sponsored Research Office: University of Iowa
105 JESSUP HALL
IOWA CITY
IA  US  52242-1316
(319)335-2123
Sponsor Congressional District: 01
Primary Place of Performance: University of Iowa
IA  US  52242-1320
Primary Place of Performance
Congressional District:
01
Unique Entity Identifier (UEI): Z1H9VJS8NG16
Parent UEI:
NSF Program(s): Evolutionary Processes,
Cross-BIO Activities,
EVOLUTIONARY GENETICS
Primary Program Source: 01001819DB NSF RESEARCH & RELATED ACTIVIT
01002122DB NSF RESEARCH & RELATED ACTIVIT
Program Reference Code(s): 097Z, 102Z, 108Z, 1228, 9150
Program Element Code(s): 112700, 727500, 737800
Award Agency Code: 4900
Fund Agency Code: 4900
Assistance Listing Number(s): 47.074

ABSTRACT

Harmful mutations can negatively affect gene, protein, and organism function. In the extreme, the accumulation of harmful mutations can lead to population extinction. The genetic information in mitochondria - the main source of energy production in most complex organisms - is usually passed intact from parents to offspring. Thus, the mitochondria should be especially prone to the buildup of harmful mutations. However, mitochondria have maintained their function for more than one billion years; how and why is an important question in evolutionary biology. This research uses a model snail system to address these questions. It takes advantage of the fact that some lineages of snails pass both their nuclear and mitochondrial genomes on to their offspring without any genetic shuffling; a process that accelerates the accumulation of mutations in these snails. By contrast, there is shuffling of genetic material between parents and offspring in other lineages of the same snail species. This project will compare different lineages of snails, some with genetic shuffling and some without. In doing so, this research will explore how harmful mutations are cleared from populations. Reducing the impact of harmful mutations is important for keeping organisms healthy. In turn, healthy organisms can guard against population extinction. It is possible that harmful mutations in the mitochondria are compensated for by mutations in nuclear genes. This hypothesis will also be tested by this research. Because functional mitochondria are important to the health of many organisms, the research will be relevant to the biomedical and agricultural communities. The research will also train a new generation of scientists and broaden participation in biology. The broader impacts include collaborations with high school students and museums. The project will also extend an award-winning partnership with the National Center for Science Education to new audiences.

The research combines genetic and functional methods to test for signatures of mitochondrial-nuclear coevolution in the New Zealand freshwater snail Potamopyrgus antipodarum. In this snail system, some lineages are sexual and others are asexual. Crucially for this study, the asexual lineages of P. antipodarum have higher mitochondrial substitution rates than the sexual lineages. This contrast in mitochondrial substitution rates permits the study's two objectives. Objective 1 will test the hypothesis that higher mitochondrial substitution rates in asexual versus sexual lineages drive stronger mitochondrial-nuclear molecular coevolutionary dynamics. One prediction of these coevolutionary dynamics is that substitution rates for proteins encoded by the nuclear genome that are then targeted to the mitochondria will be higher than the substitution rates in control nuclear gene sets. Objective 2 will test for functional effects of mitonuclear interactions on mitochondrial respiration and snail metabolic rate. Since temperature can impact snail metabolic rates, the second objective will include four different temperature treatments. Results of this research will contribute to our understanding of the mitochondrial-nuclear interactions that define eukaryotes. Furthermore, they are of broad relevance to genome evolution, speciation, and the functional and evolutionary consequences of reproductive mode variation.

This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.

PUBLICATIONS PRODUCED AS A RESULT OF THIS RESEARCH

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Matoo, O. B. "Bringing Disciplines and People Together to Characterize the Plastic and Genetic Responses of Molluscs to Environmental Change" Integrative and comparative biology , 2021 https://doi.org/doi.org/10.1093/icb/icab186 Citation Details
Paczesniak, Dorota and Klappert, Kirsten and Kopp, Kirstin and Neiman, Maurine and Seppälä, Katri and Lively, Curtis M. and Jokela, Jukka "Parasite resistance predicts fitness better than fecundity in a natural population of the freshwater snail Potamopyrgus antipodarum" Evolution , v.73 , 2019 https://doi.org/10.1111/evo.13768 Citation Details
Song, Qiudong and Magnuson, Richard and Jalinsky, Joseph and Roseman, Marissa and Neiman, Maurine "Intraspecific genetic variation for anesthesia success in a New Zealand freshwater snail" Genetica , v.149 , 2021 https://doi.org/10.1007/s10709-020-00110-6 Citation Details

PROJECT OUTCOMES REPORT

Disclaimer

This Project Outcomes Report for the General Public is displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed in this Report are those of the PI and do not necessarily reflect the views of the National Science Foundation; NSF has not approved or endorsed its content.

All complex organisms harbor multiple genomes that must work together for the organism to be healthy. In particular, this genomic collaboration underlies metabolism, the process by which complex life produces the energy and materials needed for growth and reproduction. How these genomes can work together so successfully is an open question in light of the fact that sexual reproduction means that successful genomic combinations get broken up from generation to generation. We here address this important knowledge gap by taking advantage of a New Zealand snail with an unusual asexual reproductive system that keeps these genomes together. We characterized multiple snail lineages with different genome combinations and used a variety of assays to determine how these different genomes affected phenotypes important to the organism like resistance to heat stress and oxygen consumption. Our research revealed that there are major consequences that likely result from the breakup of particular genome consequences and also suggest that some combinations are more resilient than others. These data are exciting on their own and set the stage for follow-up research into the role of these genome combinations in driving the evolution of reproductive mode and adaptation to climate change.

This research program involved many early-career scientists, and included many individuals from groups historically marginalized or underrepresented in science. These researchers participated in international scientific conferences and forged new collaborations. These students also helped develop and led a suite of scientific outreach activities in our community and in collaboration with national service organizations.


Last Modified: 07/07/2023
Modified by: Maurine Neiman

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