Award Abstract # 1726561
MRI: Acquisition of a Confocal Raman Microscope with Cell-Sorting Capability at Montana State University

NSF Org: DBI
Division of Biological Infrastructure
Recipient: MONTANA STATE UNIVERSITY
Initial Amendment Date: August 23, 2017
Latest Amendment Date: August 23, 2017
Award Number: 1726561
Award Instrument: Standard Grant
Program Manager: Robert Fleischmann
DBI
 Division of Biological Infrastructure
BIO
 Directorate for Biological Sciences
Start Date: September 1, 2017
End Date: August 31, 2021 (Estimated)
Total Intended Award Amount: $354,758.00
Total Awarded Amount to Date: $354,758.00
Funds Obligated to Date: FY 2017 = $354,758.00
History of Investigator:
  • Roland Hatzenpichler (Principal Investigator)
    roland.hatzenpichler@montana.edu
  • Matthew Fields (Co-Principal Investigator)
  • Robin Gerlach (Co-Principal Investigator)
  • Seth Walk (Co-Principal Investigator)
Recipient Sponsored Research Office: Montana State University
216 MONTANA HALL
BOZEMAN
MT  US  59717
(406)994-2381
Sponsor Congressional District: 01
Primary Place of Performance: Montana State University
309 Montana Hall
Bozeman
MT  US  59717-2470
Primary Place of Performance
Congressional District:
01
Unique Entity Identifier (UEI): EJ3UF7TK8RT5
Parent UEI:
NSF Program(s): Major Research Instrumentation
Primary Program Source: 01001718DB NSF RESEARCH & RELATED ACTIVIT
Program Reference Code(s): 9150
Program Element Code(s): 118900
Award Agency Code: 4900
Fund Agency Code: 4900
Assistance Listing Number(s): 47.074

ABSTRACT

An award is made to Montana State University (MSU) to acquire a Confocal Raman microscope with cell-sorting ability. The Center for Biofilm Engineering at MSU, where the requested instrument will be located, is a student-focused research center of excellence that was originally funded by the NSF-ERC program. The Center serves a key role, both nationally and internationally, in training biofilm researchers and also has a strong track record of broadening the participation of women and Native Americans in engineering and science through its research programs that emphasize hands-on research education. Currently, one of the most pressing challenges in microbiology is to identify roles for individual microorganisms in complex, native habitats. Raman microscopy is a novel way to study the contribution of individual microbes in complex environments that range from human and environmental health to agricultural productivity and ecosystem functioning.

Raman is a vibrational spectroscopic method that provides a fingerprint of the molecular composition of a sample. A cell's Raman spectrum contains information about its identity, physiological state, metabolic activity, and health/disease state. MSU faculty and students will use the Raman microscope to characterize the physiology, activity, and ecology of cultivated and uncultivated microbes in their native state in a large number of ecosystems, including geothermal springs, deep-sea sediment, and industrially and medically relevant biofilms. The ability to use Raman for fast and non-destructive analyses will allow living cells to be analyzed. This will enable downstream experiments such as cell separation followed by molecular analyses. The acquisition of this instrument enables the expansion of MSU faculty into novel research trajectories and help them transition the field of microbiome research from correlative studies to causal understanding of microbial function.

PUBLICATIONS PRODUCED AS A RESULT OF THIS RESEARCH

Note:  When clicking on a Digital Object Identifier (DOI) number, you will be taken to an external site maintained by the publisher. Some full text articles may not yet be available without a charge during the embargo (administrative interval).

Some links on this page may take you to non-federal websites. Their policies may differ from this site.

Hatzenpichler, Roland and Krukenberg, Viola and Spietz, Rachel L. and Jay, Zackary J. "Next-generation physiology approaches to study microbiome function at single cell level" Nature Reviews Microbiology , v.18 , 2020 10.1038/s41579-020-0323-1 Citation Details
Skorupa, D.J. and Akyel, A. and Fields, M.W. and Gerlach, R. "Facultative and anaerobic consortia of haloalkaliphilic ureolytic microorganisms capable of precipitating calcium carbonate" Journal of Applied Microbiology , v.127 , 2019 https://doi.org/10.1111/jam.14384 Citation Details
Trudgeon, Benjamin and Dieser, Markus and Balasubramanian, Narayanaganesh and Messmer, Mitch and Foreman, Christine M. "Low-Temperature Biosurfactants from Polar Microbes" Microorganisms , v.8 , 2020 10.3390/microorganisms8081183 Citation Details
Zambare, Neerja M. and Naser, Nada Y. and Gerlach, Robin and Chang, Connie B. "Mineralogy of microbially induced calcium carbonate precipitates formed using single cell drop-based microfluidics" Scientific Reports , v.10 , 2020 https://doi.org/10.1038/s41598-020-73870-y Citation Details

PROJECT OUTCOMES REPORT

Disclaimer

This Project Outcomes Report for the General Public is displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed in this Report are those of the PI and do not necessarily reflect the views of the National Science Foundation; NSF has not approved or endorsed its content.

Supported by the NSF Major Research Instrumentation program, a Confocal Raman microscope with cell sorting ability was installed in the Center for Biofilm Engineering on the campus of Montana State University (Bozeman) in January 2019.

Raman spectroscopy is a non-destructive vibrational spectroscopic method that provides a fingerprint of the molecular composition of a sample. It can be used to study samples at cellular resolution and provide information about a cell?s chemical make-up, physiological state, and metabolic activity. Designed for microbiological research applications, the newly installed Raman microscope is among a very small number of instruments in the nation that enable researchers to study life via Raman spectroscopy at sub-micrometer resolution while at the same time carrying all the cabilities of a fluorescence microscope, and allowing researchers to separate cells via laser tweezers, if desired.

At this early stage, the instrument is mainly used by researchers working on problems in environmental microbiology, astrobiology, biofilm research, biological engineering, and material sciences. Research highlights include the study of extremophilic microbes living in hot springs of Yellowstone National Park, microbes adapted to the extreme cold conditions in glacial ice, microbes capable of producing intracellular minerals (calcium carbonate), bacteria capable of orienting themselves in Earth?s geomagnetic field via the use of intracellular chains of paramagnetic greigite crystals (magnetosomes), mixed archaeal-bacterial biofilms of relevance to astrobiology, and the metabolic response of Escherichia coli and other model bacteria to Arsenic stress. 

So far, 21 researchers have been trained in the use of the instrument, including six undergraduate students, seven graduate students, and five postdoctoral scholars. 52% of the Raman microscope users were female. In the two-and-half years the instrument has been on campus, it has helped in the acquisition of $11.3M in additional funding from federal and private organizations, and has led to five peer-reviewed publications as well as 26 oral or poster presentations at national and international conferences or departmental seminars. 

Montana State University encourages any researchers interested in using Raman microspectroscopy to contact the Center for Biofilm Engineering?s Imaging Core Manager to discuss use of the instrument.


Last Modified: 09/15/2021
Modified by: Roland Hatzenpichler

Please report errors in award information by writing to: awardsearch@nsf.gov.

Print this page

Back to Top of page