Award Abstract # 1654276
CAREER: Small-scale plankton-aggregate dynamics and the biological pump: Integrating mathematical biology in research and education

NSF Org: OCE
Division Of Ocean Sciences
Recipient: UNIVERSITY OF SAN DIEGO
Initial Amendment Date: May 18, 2017
Latest Amendment Date: July 14, 2021
Award Number: 1654276
Award Instrument: Continuing Grant
Program Manager: Cynthia Suchman
csuchman@nsf.gov
 (703)292-2092
OCE
 Division Of Ocean Sciences
GEO
 Directorate for Geosciences
Start Date: July 1, 2017
End Date: June 30, 2024 (Estimated)
Total Intended Award Amount: $499,579.00
Total Awarded Amount to Date: $539,161.00
Funds Obligated to Date: FY 2017 = $53,800.00
FY 2018 = $189,845.00

FY 2019 = $113,666.00

FY 2020 = $125,506.00

FY 2021 = $56,344.00
History of Investigator:
  • Jennifer Prairie (Principal Investigator)
    jcprairie@sandiego.edu
Recipient Sponsored Research Office: University of San Diego
5998 ALCALA PARK FRNT
SAN DIEGO
CA  US  92110-2476
(619)260-6825
Sponsor Congressional District: 51
Primary Place of Performance: University of San Diego
5998 Alcala Park
San Diego
CA  US  92110-2492
Primary Place of Performance
Congressional District:
51
Unique Entity Identifier (UEI): V6S1GT51XD56
Parent UEI: V6S1GT51XD56
NSF Program(s): BIOLOGICAL OCEANOGRAPHY,
EDUCATION/HUMAN RESOURCES,OCE
Primary Program Source: 01001718DB NSF RESEARCH & RELATED ACTIVIT
01001819DB NSF RESEARCH & RELATED ACTIVIT

01001920DB NSF RESEARCH & RELATED ACTIVIT

01002021DB NSF RESEARCH & RELATED ACTIVIT

01002122DB NSF RESEARCH & RELATED ACTIVIT
Program Reference Code(s): 1045, 8811, 1389, 9232
Program Element Code(s): 165000, 169000
Award Agency Code: 4900
Fund Agency Code: 4900
Assistance Listing Number(s): 47.050

ABSTRACT

The global carbon cycle is in part modified by marine biological processes, which can impact the amount of carbon that is transported from surface waters to the deep ocean. This project will investigate interactions between planktonic grazers and marine aggregates - sinking particles that form in the surface ocean and have been shown to play an important role in marine food webs. The small scale of these biological processes makes them particularly challenging to study, but modern advances in mathematics and computer science have made direct observations of these interactions feasible. Experiments using high-resolution imaging will provide direct visual observations of zooplankton ingestion and the alteration of marine aggregates. These laboratory studies will guide the development of mathematical models to examine how these interactions affect particulate carbon sinking out of the surface ocean. This project will support an educational initiative focused on training undergraduate biology students in mathematical and computational techniques. This initiative includes the development of new interdisciplinary courses and undergraduate-focused independent research projects to help prepare the next generation of scientists in quantitative techniques that are essential to tackling the most challenging and complex biological problems.

Marine snow aggregates are particles that form in the surface ocean from organic and inorganic matter. These aggregates play a fundamental role in the biological pump, as sinking particles are a dominant contributor to the downward transfer of carbon in the ocean. However, much of the small-scale processes governing these particles and their role in the marine carbon cycle are still unknown. The goal of this project is to use mathematical and computational techniques to investigate interactions between aggregates and planktonic grazers, an understudied link in the planktonic food web that has important implications for carbon export. Three-dimensional trajectories of copepods within marine snow thin layers will be obtained to experimentally investigate copepod foraging behavior in response to patchy distributions of marine snow. In addition, high-speed imaging will allow for the direct observation of how copepods manipulate and ingest marine snow aggregates, thus affecting their size and settling velocity. Lastly, a mathematical model will be developed to study the impact of these small-scale interactions on large-scale carbon cycling and export. This project will also support the implementation of a comprehensive education plan focused on teaching undergraduate students how mathematical modeling and computational techniques can be used to address biological questions. This educational objective will be accomplished through the development of new courses in mathematical and computational biology and through the inclusion of undergraduate students in independent research projects.

PUBLICATIONS PRODUCED AS A RESULT OF THIS RESEARCH

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Cawley, Grace F and Décima, Moira and Mast, Andrea and Prairie, Jennifer C "The effect of phytoplankton properties on the ingestion of marine snow by Calanus pacificus" Journal of Plankton Research , v.43 , 2021 https://doi.org/10.1093/plankt/fbab074 Citation Details
Prairie, Jennifer C. and Montgomery, Quinn W. and Proctor, Kyle W. and Ghiorso, Kathryn S. "Effects of Phytoplankton Growth Phase on Settling Properties of Marine Aggregates" Journal of Marine Science and Engineering , v.7 , 2019 10.3390/jmse7080265 Citation Details

PROJECT OUTCOMES REPORT

Disclaimer

This Project Outcomes Report for the General Public is displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed in this Report are those of the PI and do not necessarily reflect the views of the National Science Foundation; NSF has not approved or endorsed its content.

The global carbon cycle is in part modified by marine biological processes, which can impact the amount of carbon that is transported from surface waters to the deep ocean. In this project, we observed interactions between planktonic grazers and marine snow aggregates – sinking particles that form in the surface ocean and have been shown to play an important role in the global carbon cycle and marine food webs. Although the small scale of these biological processes makes them challenging to study, we were able to use high-resolution cameras and computational techniques to analyze the images to directly observe the behavior of zooplankton interacting with marine snow aggregates, and the resulting effects on the aggregates themselves. In a first set of experiments, we applied two methodologies to confirm the ingestion of marine snow by a common species of copepods off the coast of Southern California, Calanus pacificus. Results from these experiments show that the consumption of marine snow by these copepods depends on properties related to the composition of the marine snow, and in some cases can even match or exceed their consumption of individual phytoplankton. In a second study, we observed copepods foraging in layers of marine snow aggregates, which have been commonly observed in coastal waters. We found that copepod behavior and ingestion is altered by the presence of a marine snow layer and a sharp density gradient, indicating that copepods respond to physical and/or chemical cues at the layer, thus providing insight into how different conditions in natural systems would impact these interactions. One of the most important findings arose from experiments in which we observed copepods interacting and ingesting marine snow on very small scales using high-speed cameras. These observations demonstrated that these interactions can result in the fragmentation and deformation of marine snow aggregates – a process which had never previously been directly observed. Since marine snow aggregates breaking up into smaller particles would likely result in them sinking more slowly, this has important implications for the rate that carbon is sequestered in the deep ocean. Lastly, we developed a mathematical model simulating how the chemical plume behind a sinking marine snow aggregate will be altered when that particle crosses a sharp density gradient and slows down; this phenomenon could affect the rate that these particles are ingested by zooplankton since these chemical plumes are used by organisms to chemically detect these particles. All of these findings collectively contribute to a better understanding of how interactions between zooplankton and aggregates affect the marine carbon cycle. This project also included an educational initiative, for which a new interdisciplinary course on Mathematical Modeling in Ecology was developed to teach undergraduate students how to apply advanced mathematical and computational techniques to address important ecological problems. Funding from this grant also provided experience for a postdoctoral scholar, multiple graduate students, and over 20 undergraduate students in conducting research on this topic using laboratory methods and computational techniques, thus training a new generation of oceanographic scholars to tackle problems at the interface of ecology and mathematics.

 


Last Modified: 11/18/2024
Modified by: Jennifer Prairie

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