Award Abstract # 1636893
BD Spokes: SPOKE: MIDWEST: Collaborative: Advanced Computational Neuroscience Network (ACNN)

NSF Org: IIS
Division of Information & Intelligent Systems
Recipient: TRUSTEES OF INDIANA UNIVERSITY
Initial Amendment Date: September 7, 2016
Latest Amendment Date: October 15, 2020
Award Number: 1636893
Award Instrument: Standard Grant
Program Manager: Alejandro Suarez
alsuarez@nsf.gov
 (703)292-7092
IIS
 Division of Information & Intelligent Systems
CSE
 Directorate for Computer and Information Science and Engineering
Start Date: September 1, 2016
End Date: October 31, 2021 (Estimated)
Total Intended Award Amount: $332,869.00
Total Awarded Amount to Date: $399,069.00
Funds Obligated to Date: FY 2016 = $332,609.00
FY 2020 = $66,200.00
History of Investigator:
  • Franco Pestilli (Principal Investigator)
    pestilli@utexas.edu
  • Olaf Sporns (Co-Principal Investigator)
  • Andrew Saykin (Co-Principal Investigator)
  • Lei Wang (Co-Principal Investigator)
Recipient Sponsored Research Office: Indiana University
107 S INDIANA AVE
BLOOMINGTON
IN  US  47405-7000
(317)278-3473
Sponsor Congressional District: 09
Primary Place of Performance: Indiana University
IN  US  47401-3654
Primary Place of Performance
Congressional District:
09
Unique Entity Identifier (UEI): YH86RTW2YVJ4
Parent UEI:
NSF Program(s): BD Spokes -Big Data Regional I,
IntgStrat Undst Neurl&Cogn Sys
Primary Program Source: 01001617DB NSF RESEARCH & RELATED ACTIVIT
01002021DB NSF RESEARCH & RELATED ACTIVIT
Program Reference Code(s): 028Z, 7433, 8083, 8089, 8091
Program Element Code(s): 024Y00, 862400
Award Agency Code: 4900
Fund Agency Code: 4900
Assistance Listing Number(s): 47.070

ABSTRACT

Novel neuroscience tools and techniques are necessary to enable insight into the building blocks of neural circuits, the interactions between these circuits that underpin the functions of the human brain, and modulation of these circuits that affect our behavior. To leverage rapid technological development in sensing, imaging, and data analysis new ground breaking advances in neuroscience are necessary to facilitate knowledge discovery using data science methods. To address this societal grand challenge, the project will foster new interdisciplinary collaborations across computing, biological, mathematical, and behavioral science disciplines together with partnerships in academia, industry, and government at multiple levels. The Big Data Neuroscience Spoke titled Midwest: Advanced Computational Neuroscience Network (ACNN) is strongly aligned with the national priority area of neuroscience and brings together a diverse set of committed regional partners to enable the Midwest region to realize the promise of Big Data for neuroscience. The ACNN Spoke will build broad consensus on the core requirements, infrastructure, and components needed to develop a new generation of sustainable interdisciplinary Neuroscience Big Data research. ACNN will leverage the strengths and resources in the Midwest region to increase innovation and collaboration for the understanding of the structure, physiology, and function of the human brain through partnerships and services in education, tools, and best practices.

The ACNN will design, pilot and support powerful neuroscientific computational resources for high-throughput, collaborative, and service-oriented data aggregation, processing and open-reproducible science. The ACNN Spoke framework will address three specific problems related to neuroscience Big Data: (1) data capture, organization, and management involving multiple centers and research groups, (2) quality assurance, preprocessing and analysis that incorporates contextual metadata, and (3) data communication to software and hardware computational resources that can scale with the volume, velocity, and variety of neuroscience datasets. The ACNN will build a sustainable ecosystem of neuroscience community partners in both academia and industry using existing technologies for collaboration and virtual meeting together with face-to-face group meetings. The planned activities of the ACNN Spoke will also allow the Midwest Big Data Hub to disseminate additional Big Data technologies resources to the neuroscience community, including access to supercomputing facilities, best practices, and platforms.

This award received co-funding from CISE Divisions of Advanced Cyberinfrastructure (ACI) and Information and Intelligent Systems (IIS).

PUBLICATIONS PRODUCED AS A RESULT OF THIS RESEARCH

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(Showing: 1 - 10 of 32)
Ahmadi, Khazar and Fracasso, Alessio and Puzniak, Robert J. and Gouws, Andre D. and Yakupov, Renat and Speck, Oliver and Kaufmann, Joern and Pestilli, Franco and Dumoulin, Serge O. and Morland, Antony B. and Hoffmann, Michael B. "Triple visual hemifield maps in a case of optic chiasm hypoplasia" NeuroImage , v.215 , 2020 https://doi.org/10.1016/j.neuroimage.2020.116822 Citation Details
Avesani, Paolo and McPherson, Brent and Hayashi, Soichi and Caiafa, Cesar F. and Henschel, Robert and Garyfallidis, Eleftherios and Kitchell, Lindsey and Bullock, Daniel and Patterson, Andrew and Olivetti, Emanuele and Sporns, Olaf and Saykin, Andrew J. a "The open diffusion data derivatives, brain data upcycling via integrated publishing of derivatives and reproducible open cloud services" Scientific Data , v.6 , 2019 10.1038/s41597-019-0073-y Citation Details
Babo-Rebelo, M and Puce, A and Bullock, D and Hugueville, L and Pestilli, F and Adam, C and Lehongre, K and Lambrecq, V and Dinkelacker, V and George, N "Visual Information Routes in the Posterior Dorsal and Ventral Face Network Studied with Intracranial Neurophysiology and White Matter Tract Endpoints" Cerebral Cortex , 2021 https://doi.org/10.1093/cercor/bhab212 Citation Details
Berto, Giulia and Avesani, Paolo and Pestilli, Franco and Bullock, Daniel and Caron, Bradley and Olivetti, Emanuele "Anatomically-Informed Multiple Linear Assignment Problems for White Matter Bundle Segmentation" ISBI , 2019 10.1109/ISBI.2019.8759174 Citation Details
Bullock, Daniel and Takemura, Hiromasa and Caiafa, Cesar F. and Kitchell, Lindsey and McPherson, Brent and Caron, Bradley and Pestilli, Franco "Associative white matter connecting the dorsal and ventral posterior human cortex" Brain Structure and Function , 2019 10.1007/s00429-019-01907-8 Citation Details
Caiafa, Cesar F and Cichocki, A and Pestilli, Franco "A Sparse Tensor Decomposition with Multi-Dictionary Learning Applied to Diffusion Brain Imaging" SPARS , 2017 Citation Details
Caiafa, Cesar F. and Pestilli, Franco "Multidimensional encoding of brain connectomes" Scientific Reports , v.7 , 2017 10.1038/s41598-017-09250-w Citation Details
Caiafa, Cesar F and Sporns, Olaf and Saykin, Andrew J and Pestilli, Franco "Unified representation of tractography and diffusion-weighted MRI data using sparse multidimensional arrays" Neural Information Processing - Letters and Reviews , 2017 Citation Details
Caron, Bradley and Stuck, Ricardo and McPherson, Brent and Bullock, Daniel and Kitchell, Lindsey and Faskowitz, Joshua and Kellar, Derek and Cheng, Hu and Newman, Sharlene and Port, Nicholas and Pestilli, Franco "Collegiate athlete brain data for white matter mapping and network neuroscience" Scientific Data , v.8 , 2021 https://doi.org/10.1038/s41597-021-00823-z Citation Details
Chandio, Bramsh Qamar and Risacher, Shannon Leigh and Pestilli, Franco and Bullock, Daniel and Yeh, Fang-Cheng and Koudoro, Serge and Rokem, Ariel and Harezlak, Jaroslaw and Garyfallidis, Eleftherios "Bundle analytics, a computational framework for investigating the shapes and profiles of brain pathways across populations" Scientific Reports , v.10 , 2020 https://doi.org/10.1038/s41598-020-74054-4 Citation Details
Vinci-Booher, S. and Caron, B. and Bullock, D. and James, K. and Pestilli, F. "Development of white matter tracts between and within the dorsal and ventral streams" Brain Structure and Function , v.227 , 2022 https://doi.org/10.1007/s00429-021-02414-5 Citation Details
(Showing: 1 - 10 of 32)

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