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Award Abstract # 1636840
BD Spokes: SPOKE: MIDWEST: Collaborative: Advanced Computational Neuroscience Network (ACNN)

NSF Org: OAC
Office of Advanced Cyberinfrastructure (OAC)
Recipient: REGENTS OF THE UNIVERSITY OF MICHIGAN
Initial Amendment Date: September 7, 2016
Latest Amendment Date: December 6, 2016
Award Number: 1636840
Award Instrument: Standard Grant
Program Manager: Alejandro Suarez
alsuarez@nsf.gov
 (703)292-7092
OAC
 Office of Advanced Cyberinfrastructure (OAC)
CSE
 Directorate for Computer and Information Science and Engineering
Start Date: September 1, 2016
End Date: November 30, 2020 (Estimated)
Total Intended Award Amount: $343,263.00
Total Awarded Amount to Date: $343,263.00
Funds Obligated to Date: FY 2016 = $343,263.00
History of Investigator:
  • Richard Gonzalez (Principal Investigator)
    gonzo@umich.edu
  • Ivo Dinov (Co-Principal Investigator)
  • John Marcotte (Co-Principal Investigator)
  • George Alter (Former Co-Principal Investigator)
Recipient Sponsored Research Office: Regents of the University of Michigan - Ann Arbor
1109 GEDDES AVE STE 3300
ANN ARBOR
MI  US  48109-1015
(734)763-6438
Sponsor Congressional District: 06
Primary Place of Performance: University of Michigan Ann Arbor
MI  US  48109-1274
Primary Place of Performance
Congressional District:
06
Unique Entity Identifier (UEI): GNJ7BBP73WE9
Parent UEI:
NSF Program(s): BD Spokes -Big Data Regional I,
International Research Collab,
XD-Extreme Digital,
IntgStrat Undst Neurl&Cogn Sys
Primary Program Source: 01001617DB NSF RESEARCH & RELATED ACTIVIT
Program Reference Code(s): 028Z, 7433, 8083, 8089, 8091
Program Element Code(s): 024Y00, 729800, 747600, 862400
Award Agency Code: 4900
Fund Agency Code: 4900
Assistance Listing Number(s): 47.070

ABSTRACT

Novel neuroscience tools and techniques are necessary to enable insight into the building blocks of neural circuits, the interactions between these circuits that underpin the functions of the human brain, and modulation of these circuits that affect our behavior. To leverage rapid technological development in sensing, imaging, and data analysis new ground breaking advances in neuroscience are necessary to facilitate knowledge discovery using data science methods. To address this societal grand challenge, the project will foster new interdisciplinary collaborations across computing, biological, mathematical, and behavioral science disciplines together with partnerships in academia, industry, and government at multiple levels. The Big Data Neuroscience Spoke titled Midwest: Advanced Computational Neuroscience Network (ACNN) is strongly aligned with the national priority area of neuroscience and brings together a diverse set of committed regional partners to enable the Midwest region to realize the promise of Big Data for neuroscience. The ACNN Spoke will build broad consensus on the core requirements, infrastructure, and components needed to develop a new generation of sustainable interdisciplinary Neuroscience Big Data research. ACNN will leverage the strengths and resources in the Midwest region to increase innovation and collaboration for the understanding of the structure, physiology, and function of the human brain through partnerships and services in education, tools, and best practices.

The ACNN will design, pilot and support powerful neuroscientific computational resources for high-throughput, collaborative, and service-oriented data aggregation, processing and open-reproducible science. The ACNN Spoke framework will address three specific problems related to neuroscience Big Data: (1) data capture, organization, and management involving multiple centers and research groups, (2) quality assurance, preprocessing and analysis that incorporates contextual metadata, and (3) data communication to software and hardware computational resources that can scale with the volume, velocity, and variety of neuroscience datasets. The ACNN will build a sustainable ecosystem of neuroscience community partners in both academia and industry using existing technologies for collaboration and virtual meeting together with face-to-face group meetings. The planned activities of the ACNN Spoke will also allow the Midwest Big Data Hub to disseminate additional Big Data technologies resources to the neuroscience community, including access to supercomputing facilities, best practices, and platforms.

This award received co-funding from CISE Divisions of Advanced Cyberinfrastructure (ACI) and Information and Intelligent Systems (IIS).

PUBLICATIONS PRODUCED AS A RESULT OF THIS RESEARCH

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Zheng, Gen and Kalinin, Alexandr A. and Dinov, Ivo D. and Meixner, Walter and Zhu, Shengtao and Wiley, John W. "Hypothesis: Caco-2 cell rotational 3D mechanogenomic turing patterns have clinical implications to colon crypts" Journal of Cellular and Molecular Medicine , v.22 , 2018 10.1111/jcmm.13853 Citation Details

PROJECT OUTCOMES REPORT

Disclaimer

This Project Outcomes Report for the General Public is displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed in this Report are those of the PI and do not necessarily reflect the views of the National Science Foundation; NSF has not approved or endorsed its content.

The Advanced Computational Neuroscience Network (ACNN) was formed in 2016 by a multi-disciplinary set of investigators across multiple academic institutions in the Midwest. The ACNN was developed as part of the Midwest Big Data Hub.
The ACNN community was built through grassroots activities and supports a sustainable infrastructure promoting ideation, effective communications, productive interactions, diverse contributions, and collaborative partnerships between novice and established neuroscience researchers.
The ACNN provides domain expertise, computational infrastructure, modern learning resources, advanced software tools and web-services supporting computational neuroscience, data science, and biomedical informatics. ACNN holds annual workshops and symposia to disseminate knowledge, engage the broader community, and share best practices in data sharing protocol design, interoperability, and computational constructs in the neurosciences.  ACNN fosters research collaborations to support state-of-the-art computational infrastructure in the neurosciences.
Workshops were held in Ann Arbor, University of Michigan, in 2016; Bloomington, Indiana University, in 2017; Cleveland, Case Western Reserve University, in 2018; Ann Arbor, University of Michigan, in 2019; and a virtual conference in 2020 due to COVID-19.  We have plans to conduct another virtual workshop in 2021, which will be sponsored by the Universit of Illiniois,  Urbana-Champaign. Materials from these workshops as well as recordings of the talks can be found at www.NeuroscienceNetwork.org.

 


Last Modified: 05/13/2021
Modified by: Richard D Gonzalez

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