Award Abstract # 1455474
IDBR: TYPE A - Development of an In situ Single-cell Mass Spectrometer for Mapping Small-molecule Expression in the Developing Embryo

NSF Org: DBI
Division of Biological Infrastructure
Recipient: GEORGE WASHINGTON UNIVERSITY (THE)
Initial Amendment Date: April 24, 2015
Latest Amendment Date: April 12, 2017
Award Number: 1455474
Award Instrument: Continuing Grant
Program Manager: Robert Fleischmann
DBI
 Division of Biological Infrastructure
BIO
 Directorate for Biological Sciences
Start Date: May 1, 2015
End Date: June 30, 2018 (Estimated)
Total Intended Award Amount: $395,854.00
Total Awarded Amount to Date: $395,854.00
Funds Obligated to Date: FY 2015 = $252,697.00
FY 2017 = $0.00
History of Investigator:
  • Peter Nemes (Principal Investigator)
    nemes@umd.edu
  • Sally Moody (Co-Principal Investigator)
Recipient Sponsored Research Office: George Washington University
1918 F ST NW
WASHINGTON
DC  US  20052-0042
(202)994-0728
Sponsor Congressional District: 00
Primary Place of Performance: George Washington University
725 21st Street, NW
Washington
DC  US  20052-0051
Primary Place of Performance
Congressional District:
00
Unique Entity Identifier (UEI): ECR5E2LU5BL6
Parent UEI:
NSF Program(s): INSTRUMENTAT & INSTRUMENT DEVP
Primary Program Source: 01001516DB NSF RESEARCH & RELATED ACTIVIT
01001718DB NSF RESEARCH & RELATED ACTIVIT
Program Reference Code(s):
Program Element Code(s): 110800
Award Agency Code: 4900
Fund Agency Code: 4900
Assistance Listing Number(s): 47.074

ABSTRACT

An award is made to the George Washington University to develop a device that will be able to measure the production of broad types of biomolecules in multiple, individual cells of the developing embryo. This project will enhance education by integrating biology and chemistry, and provide new investigative tools to raise creative research opportunities in basic and applied research. Development of the single-cell mass spectrometer will require regular interactions between analytical chemists, biologists, mass spectrometrists, and curators of data repositories, essentially creating an interdisciplinary environment for students and researchers to accomplish training beyond the classical curriculum in these disciplines. By demonstrating the device at the George Washington University and discussing its design, performance, and use at national conferences and publications, this work will broaden scientific literacy and inform of the availability of the device to a broader base of users. Data resulting from measurements on the production of biomolecules during embryogenesis will be disseminated in publicly accessible data repositories, providing a larger number of users with access to facilitate research and education in cell and developmental biology and neuroscience. Notably, the combination of these scientific and outreach elements, including participation of local high-school students in the project, will enhance research and education at the interface of biology, instrument development, and analytical chemistry, providing interdisciplinary solutions to current and future challenges in science and education.

Characterization of biomolecular expression in single cells of the embryo will provide new insights into basic biochemical mechanisms that orchestrate embryonic development, the complex suite of processes by which a fertilized egg gives rise to an entire, fully functioning organism such as the frog, fish, or human. Although it has been technologically feasible to measure genes and transcripts in single embryonic cells, a lack of analytical technology has so far hindered the characterization of proteins, peptides, and metabolites in single embryonic cells. This project will provide one such technological innovation, a single-cell mass spectrometer, by combining traditional tools in cell and developmental biology and neuroscience with next-generation instrumentation from bioanalytical chemistry. Specifically, optical microscopy, microinjection, microcapillary electrophoresis, and nanoelectrospray ionization will be adapted to high-resolution tandem mass spectrometry to determine the production of biomolecules, proteins to metabolites, in multiple cells of the embryo using the frog Xenopus laevis and zebrafish as models. The instrument will be developed in collaboration with leading mass spectrometric industry, biologists, and students, and will be tested by biologists and students working with these important developmental models.

PUBLICATIONS PRODUCED AS A RESULT OF THIS RESEARCH

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Camille Lombard-Banek, Sally A. Moody, and Peter Nemes "Single-Cell Mass Spectrometry for Discovery Proteomics: QuantifyingTranslational Cell Heterogeneity in the 16-Cell Frog (Xenopus)Embryo" Angewandte Chemie International Edition , v.55 , 2016 , p.2454 10.1002/anie.201510411
Camille Lombard-Banek, Sushma Reddy, Sally A. Moody, and Peter Nemes "Label-free Quantification of Proteins in Single Embryonic Cells by Capillary Electrophoresis High-resolution Mass Spectrometry" Molecular and Cellular Proteomics , v.15 , 2016 , p.2756 10.1074/mcp.M115.057760
C. Lombard-Banek, E. P. Portero, R. M. Onjiko, and P. Nemes* "New-generation mass spectrometry expands the toolbox of cell and developmental biology" genesis , v.55 , 2016 , p.e23012 10.1002/dvg.23012
C. Lombard-Banek, Sally A. Moody, and P. Nemes* "High-sensitivity mass spectrometry for probing gene translation in single embryonic cells in the early frog (Xenopus) embryo" Frontiers in Cell and Developmental Biology , v.4 , 2016 , p.Article n 10.3389/fcell.2016.00100

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