Award Abstract # 1316036
Collaborative Research: Chemical and Biological Characterizations of Phosphonate and Polyphosphate Dynamics in Marine Phytoplankton

NSF Org: OCE
Division Of Ocean Sciences
Recipient: THE TRUSTEES OF COLUMBIA UNIVERSITY IN THE CITY OF NEW YORK
Initial Amendment Date: February 11, 2013
Latest Amendment Date: February 11, 2013
Award Number: 1316036
Award Instrument: Standard Grant
Program Manager: Henrietta Edmonds
hedmonds@nsf.gov
 (703)292-7427
OCE
 Division Of Ocean Sciences
GEO
 Directorate for Geosciences
Start Date: January 1, 2013
End Date: April 30, 2016 (Estimated)
Total Intended Award Amount: $358,059.00
Total Awarded Amount to Date: $358,059.00
Funds Obligated to Date: FY 2011 = $358,059.00
History of Investigator:
  • Sonya Dyhrman (Principal Investigator)
    sd2512@columbia.edu
Recipient Sponsored Research Office: Columbia University
615 W 131ST ST
NEW YORK
NY  US  10027-7922
(212)854-6851
Sponsor Congressional District: 13
Primary Place of Performance: Columbia University Lamont Doherty Earth Observatory
61 Route 9W
Palisades
NY  US  10964-1000
Primary Place of Performance
Congressional District:
17
Unique Entity Identifier (UEI): F4N1QNPB95M4
Parent UEI:
NSF Program(s): BIOLOGICAL OCEANOGRAPHY
Primary Program Source: 01001112DB NSF RESEARCH & RELATED ACTIVIT
Program Reference Code(s): 1389, 1670, 4444, 9117
Program Element Code(s): 165000
Award Agency Code: 4900
Fund Agency Code: 4900
Assistance Listing Number(s): 47.050

ABSTRACT

Phosphorus (P) is a recognized essential nutrient for marine primary production and its inorganic chemistry has been well studied. However, the dissolved organic phosphorus pool (DOP) has been little studied even given its importance as a phosphorus source to microorganisms. This project will identify biogenic sources of P compounds to DOP using controlled culture studies focused on phosphonate and polyphosphate. These compound classes exert important controls over P cycling, carbon fixation and community structure and export from the upper ocean, and long-term sequestration. The study will employ innovative methods, including molecular tools and novel chemical analyses, to examine specific phosphonate and polyphosphate compound production by key phytoplankton taxa under different environmental conditions. Four hypotheses are driving the proposed research and focus the study on the primary research questions. The study will improve our understanding of the production of specific P compounds, and provide insight into the bioavailability of DOP and the influence of P on biological production.

The project will train three graduate students and there is a substantial outreach component associated with the study. The PIs will integrate education and outreach to K-12 communities using Whyville, an online virtual world geared specifically to 8-14 year old children. During this study, the investigators will expand the use of Whyville as a science learning tool through interactions with at-risk children as part of ScienceQuest, an after school program at a housing shelter, and through intensive summer short courses to school teachers.

PUBLICATIONS PRODUCED AS A RESULT OF THIS RESEARCH

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Angelique White and Sonya T. Dyhrman "THE MARINE PHOSPHORUS CYCLE" Frontiers in Microbiology , v.4 , 2013 doi: 10.3389/fmicb.2013.00105
Diaz, J., Ingall, E.D., Snow, S.D., Benitez-Nelson, C.R., Taillefert, M. and Brandes, J.A. "Potential role of inorganic polyphosphate in the cycling of phosphorus within the hypoxic water column of Effingham Inlet, British Columbia." Global Biogeochemical Cycles , v.26 , 2012 doi:10.1029/2011GB00
Diaz, J., Ingall, E.D., Snow, S.D., Benitez-Nelson, C.R., Taillefert, M. and Brandes, J.A. "Potential role of inorganic polyphosphate in the cycling of phosphorus within the hypoxic watercolumn of Effingham Inlet, British Columbia." Global Biogeochemical Cycles , v.26 , 2012 , p.N/A doi:10.1029/2011GB004226
Ingall, E.D., Diaz, J.M., Longo, A.F., Oakes, M., Finney, L., Vogt, S., Lai, B., Yager, P.L., Twining, B.S., and Brandes, J.A. "Role of biogenic silica in the removal of iron from Antarctic Seas." Nature Communications , v.4 , 2013 doi: 10.1038/ncomms2981
Julia M. Diaz, Karin M. Bjorkman, Sheean T. Haley, Ellery D. Ingall, Dave M. Karl, Amelia F. Longo, and Sonya T. Dyhrman "Polyphosphate content and dynamics at Station ALOHA, North Pacific Subtropical Gyre." Limnology and Oceanography , v.61 , 2016 , p.227
Mary Ann Moran, Elizabeth B. Kujawinski, Aron Stubbins, Rob Fatland, Lihini I. Aluwihare, Alison Buchan, Byron C. Crump, Pieter C. Dorrestein, Sonya T. Dyhrman, Nancy Hess, Krista Longnecker, Patricia M. Medeiros, Jutta Niggemann, Ingrid Obernosterer, Dan "DECIPHERING OCEAN CARBON IN A CHANGING WORLD" Proceedings of the National Academy of Sciences , v.113 , 2016 , p.3143
Patrick Martin, Sonya T. Dyhrman, Michael W. Lomas, Nicole Poulton, and Benjamin A. S. Van Mooy "Marein microbial response to low phosphorus results in accumulation and enhanced cycling of polyphosphate in the Sargasso Sea" Proceedings of the National Academy of Sciences , v.111 , 2014 , p.8089
Sonya T. Dyhrman, Bethany D. Jenkins, Tatiana A. Rynearson, Mak A. Saito, Melissa L. Mercier, Harriet Alexander, LeAnn P. Whitney, Andrea Drzewianowski, Vladimir V. Bulygin, Erin M. Bertrand, Zhijin Wu, Claudia Benitez-Nelson, and #Abigail Heithoff "The transcriptome and proteome of the diatom Thalassiosira pseudonana reveal a diverse phosphorus stress response." Public Library of Science (PLoS) One , 2012 , p.e3376
Sonya T. Dyhrman, Bethany D. Jenkins, Tatiana A. Rynearson, Mak A. Saito, MelissaL. Mercier, #Harriet Alexander, LeAnn P. Whitney, Andrea Drzewianowski, Vladimir V.Bulygin, Erin M. Bertrand, Zhijin Wu, Claudia Benitez-Nelson, and #Abigail Heithoff "The transcriptome and proteome of the diatom Thalassiosira pseudonana reveal a diversephosphorus stress response." Public Library of Science (PLoS) One , v.7 , 2012 , p.N/A doi:10.1371/journal.pone.0033768

PROJECT OUTCOMES REPORT

Disclaimer

This Project Outcomes Report for the General Public is displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed in this Report are those of the PI and do not necessarily reflect the views of the National Science Foundation; NSF has not approved or endorsed its content.

Phosphorus (P) is an essential nutrient that is frequently found in complex organic forms.  Dissolved organic phosphorus (DOP) is increasingly thought to play a critical role in the distribution and activities of marine microbes, and as such DOP can influence primary production and the extent to which ocean microbes called phytoplankton cycle carbon. Despite the importance of DOP, there are analytical challenges that have historically hindered its study. Given the importance of DOP as a phosphorus source to microorganisms and the climatic and ecosystem implications of DOP utilization, here we focused on understanding what phosphorus compounds are produced and consumed by phytoplankton.

Intellectual merit

This project used an innovative combination of methods, and method development, to examine the composition of phosphorus produced by phytoplankton, how this varies under different conditions, and how this is controlled at the molecular level.  Further studies were also performed to evaluate how bioavailable these compounds are.  The research was structured around the following general goals:

1)  Characterize the proportions of the major P compound classes (phosphonates, polyphosphates, and phosphoesters) produced by major phytoplankton functional groups.

2)  Track changes in the proportions of the major P compound classes produced by phytoplankton in different conditions.

3)  Connect patterns in P-related gene expression to phosphorus dynamics in model cultures.

4)  Compare the diversity in P speciation observed in laboratory studies to P biogeochemistry in the ocean.

Research done on this project applied a new method for concentrating DOP and assaying polyphosphate concentration and showed that the cellular dynamics of polyphosphate concentration, and nucleotide metabolism, are modulated by phosphorus physiological ecology in key phytoplankton like diatoms, and that this is controlled at the transcriptional level.  Using a combination of approaches, which leveraged cruises of opportunity we showed that the relative contribution of polyphosphate in the total particulate phosphate pool is modulated as a function of phosphorus physiology and biogeochemistry in both the North Atlantic and the North Pacific.  Culture controls confirmed that phosphorus physiology also controlled release of polyphosphate to the dissolved phase.  Last, polyphosphate bioavailability was shown to vary between even closely related phytoplankton, suggesting that phosphorus form could influence community composition in the phytoplankton. 

Taken together, the overarching finding from this research is that the physiology of the phytoplankton, in particular the extent to which they may be phosphorus deficient, has a large impact on the production and consumption of polyphosphate and DOP.  Key outcomes are as follows:

1)    Phosphorus compound classes (phosphonate, polyphosphate and phosphoester) are produced by major phytoplankton functional groups.  The production of phosphonate is difficult to detect because it has signatures similar to other compounds.  Although there was no clear evidence of phosphonate production in the eukaryotic phytoplankton, phosphonate was produced by some cyanobacteria.

2)    There are changes in the proportions of the major phosphorus compound classes produced by phytoplankton in different conditions, namely as a function of phosphorus deficiency. In some cases (e.g. nucleotides, polyphosphate), this is linked to changes in the transcription of genes in these metabolic pathways.

3)    Patterns in phosphorus biogeochemistry, includin...

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