Award Abstract # 1246373
Collaborative Research: Importance of Heterotrophic and Phototrophic N2 Fixation in the McMurdo Dry Valleys on Local, Regional and Landscape Scales

NSF Org: OPP
Office of Polar Programs (OPP)
Recipient: SAN FRANCISCO STATE UNIVERSITY
Initial Amendment Date: August 14, 2013
Latest Amendment Date: May 29, 2014
Award Number: 1246373
Award Instrument: Standard Grant
Program Manager: Jennifer Burns
OPP
 Office of Polar Programs (OPP)
GEO
 Directorate for Geosciences
Start Date: August 15, 2013
End Date: July 31, 2018 (Estimated)
Total Intended Award Amount: $469,212.00
Total Awarded Amount to Date: $478,712.00
Funds Obligated to Date: FY 2013 = $469,212.00
FY 2014 = $9,500.00
History of Investigator:
  • Edward Carpenter (Principal Investigator)
    ecarpent@sfsu.edu
Recipient Sponsored Research Office: San Francisco State University
1600 HOLLOWAY AVE
SAN FRANCISCO
CA  US  94132-1740
(415)338-7090
Sponsor Congressional District: 11
Primary Place of Performance: Romberg Tiburon Center for Environmental Studies
3150 Paradise Drive
Tiburon
CA  US  94920-1205
Primary Place of Performance
Congressional District:
02
Unique Entity Identifier (UEI): F4SLJ5WF59F6
Parent UEI: JW7YN4NDAHC1
NSF Program(s): ANT Organisms & Ecosystems
Primary Program Source: 0100XXXXDB NSF RESEARCH & RELATED ACTIVIT
Program Reference Code(s): 9251
Program Element Code(s): 511100
Award Agency Code: 4900
Fund Agency Code: 4900
Assistance Listing Number(s): 47.078

ABSTRACT

The McMurdo Dry Valleys in Antarctica are recognized as being the driest, coldest and probably one of the harshest environments on Earth. In addition to the lack of water, the biota in the valleys face a very limited supply of nutrients such as nitrogen compounds - necessary for protein synthesis. The glacial streams of the Dry Valleys have extensive cyanobacterial (blue green algae) mats that are a major source of carbon and nitrogen compounds to biota in this region. While cyanobacteria in streams are important as a source of these compounds, other non-photosynthetic bacteria also contribute a significant fraction (~50%) of fixed nitrogen compounds to valley biota. This research effort will involve an examination of exactly which non-phototrophic bacteria are involved in nitrogen fixation and what environmental factors are responsible for controlling nitrogen fixation by these microbes. This work will resolve the environmental factors that control the activity, abundance and diversity of nitrogen-fixing microbes across four of the McMurdo Dry Valleys. This will allow for comparisons among sites of differing latitude, temperature, elevation and exposure to water. These results will be integrated into a landscape wetness model that will help determine the impact of both cyanobacterial and non-photosynthetic nitrogen fixing microorganisms in this very harsh environment.

The Dry Valleys in many ways resemble the Martian environment, and understanding the primitive life and very simple nutrient cycling in the Dry Valleys has relevance for understanding how life might have once existed on other planets. Furthermore, the study of microbes from extreme environments has resulted in numerous biotechnological applications such as the polymerase chain reaction for amplifying DNA and mechanisms for freeze resistance in agricultural crops. Thus, this research should yield insights into how biota survive in extreme environments, and these insights could lead to other commercial applications.

PUBLICATIONS PRODUCED AS A RESULT OF THIS RESEARCH

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Neiderberger, T.D., J.A. Sohm, T.E. Gunderson, A.E. Parker, J. Tirindelli, D.G. Capone, E.J. Carpenter, S.C. Cary "Microbial community composition of transiently wetted Antarctic Dry Valley soils." Frontiers in Microbiology, section Terrestrial Microbiology. , 2015 DOI: 10.3389/fmicb.2015.00009
Niederberger TD, Sohm JA, Gunderson TE, Parker AE, Tirindelli J, Capone DG, Carpenter EJ and Cary SC. "Carbon-fixation rates and associated microbial communities residing in arid and ephemerally wet Antarctic Dry Valley soils" Frontiers in Terrestrial Microbiology , 2016 10.3389/fmicb.2015.01347

PROJECT OUTCOMES REPORT

Disclaimer

This Project Outcomes Report for the General Public is displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed in this Report are those of the PI and do not necessarily reflect the views of the National Science Foundation; NSF has not approved or endorsed its content.

Outcomes

Through our earlier research of the biogeochemical importance of the primitive microbial mats in the Miers Valley of the Dry Valleys of Antarctica in the cycles of carbon and nitrogen, we uncovered several novel findings relating to nitrogen fixation in these seasonally wetted soils. Most importantly, both molecular and activity-based results indicate that a large diversity of non-phototrophic (not capable of photosynthesis) bacteria make up a sizable fraction of phylotypes containing nitrogenase genes (genes responsible for nitrogen fixation) and that these potential nitrogen fixing organisms are also actively fixing nitrogen in these soils. This sub-population can account for over 50% of the nitrogen fixation activity in some mats. These surprising results have shifting the long-held paradigm that cyanobacteria are the primary nitrogen fixers in Dry Valley soils, and this distinction is an important one to understand, as phototrophic diazotrophs are a source of fixed carbon while heterotrophic (organisms which need organic matter as an energy source) diazotrophs are a sink. Intensive research is needed to fully understand the importance and drivers of heterotrophic nitrogen fixation across the entire Dry Valleys system, as each valley has its own unique characteristics.

During the current project period, we sought to determine how generalizable our observations are by extending them to a broader range of sites across several contrasting valleys including the Taylor, Garwood and Victoria Valleys. We also addressed the major questions as to what factors are responsible for the selection and dominance of non-phototrophic nitrogen fixers in these systems and how these groups respond to environmental variation (e.g. light, temperature and degree of wetting). Our research is helping resolve these environmental factors driving microbial mat communities with respect to microbial (and specifically diazotrophic) community identity, diversity and biogeochemical significance in the wetted soils of the valleys. While community structure appears to vary somewhat among the sites, general principals gleaned from our original studies appear to apply as non-phototrophic, and specifically sulfate reducing bacteria contribute substantially to nitrogen inputs in these systems. We also noted the distribution of a key photosynthetic gene across the range of mats sampled. In general, while mat morphology varies among sites depending on the degree of wetness, community composition appears to be robust and similar among all sites. 

Specifically, we have extended our current single Valley study site to include a variety of Antarctic ice-free soil habitats, thereby allowing comparison among sites of differing latitude, temperature, elevation, and exposure to water.

 


Last Modified: 08/06/2018
Modified by: Edward J Carpenter

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