Award Abstract # 0829849
Collaborative Research: From Acorus to Zingiber - Assembling the Phylogeny of the Monocots

NSF Org: DEB
Division Of Environmental Biology
Recipient: UNIVERSITY OF MISSOURI SYSTEM
Initial Amendment Date: August 20, 2008
Latest Amendment Date: August 20, 2008
Award Number: 0829849
Award Instrument: Standard Grant
Program Manager: Charles Lydeard
DEB
 Division Of Environmental Biology
BIO
 Directorate for Biological Sciences
Start Date: September 1, 2008
End Date: August 31, 2011 (Estimated)
Total Intended Award Amount: $270,000.00
Total Awarded Amount to Date: $270,000.00
Funds Obligated to Date: FY 2008 = $270,000.00
History of Investigator:
  • Joseph Pires (Principal Investigator)
    piresjc@missouri.edu
Recipient Sponsored Research Office: University of Missouri-Columbia
121 UNIVERSITY HALL
COLUMBIA
MO  US  65211-3020
(573)882-7560
Sponsor Congressional District: 03
Primary Place of Performance: University of Missouri-Columbia
121 UNIVERSITY HALL
COLUMBIA
MO  US  65211-3020
Primary Place of Performance
Congressional District:
03
Unique Entity Identifier (UEI): SZPJL5ZRCLF4
Parent UEI:
NSF Program(s): ASSEMBLING THE TREE OF LIFE
Primary Program Source: 01000809DB NSF RESEARCH & RELATED ACTIVIT
Program Reference Code(s): 7689, 9169, EGCH
Program Element Code(s): 768900
Award Agency Code: 4900
Fund Agency Code: 4900
Assistance Listing Number(s): 47.074

ABSTRACT

Monocots (including such groups as grasses, palms, orchids, and philodendrons) include more than 65,000 species of flowering plants, occur in almost all habitats, and provide the great majority of the human diet. A definitive family tree for this group will be developed and used to understand the broad-scale evolution of monocots over geologic time. A total of 23 genes in 601 species, whole chloroplast genomes in 175 species, and all genes expressed in 50 species will be sequenced and used to reconstruct the evolutionary history of this group. Additionally, phenotypic data from living and fossil species will be collected, and all data will be analyzed integratively to provide a comprehensive understanding of monocot evolution.

The resulting family tree will provide the foundation for many new studies in physiology, ecology, biogeography, and genomics of flowering plants. Web access to all data and results will be provided to researchers and K-12 teachers and students. Several post-doctoral fellows, graduate students, and undergraduates (with a focus on women and minorities) will be trained, and four young faculty will be supported. A museum exhibit on the evolution of flowering plants will be produced for high-profile venues in New York, Chicago, Denver, and Berkeley, and a children's monocot garden exhibit will be developed at the New York Botanical Garden. Posters illustrating monocot diversity and evolution will be distributed to colleges, and staff will give talks at public high schools.

PUBLICATIONS PRODUCED AS A RESULT OF THIS RESEARCH

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Duarte, J.M, Wall, P.K., Edger, P.P., Landherr, L.L., Ma, H., Pires, J.C., Leebens-Mack, J. and C.W. dePamphilis "Identification of shared single copy nuclear genes in Arabidopsis, Populus, Vitis and Oryza and their phylogenetic utility across various taxonomic levels" BMC Evolutionary Biology , v.10 , 2010 , p.61 doi:10.1186/1471-2148-10-61
Galbraith, D.W., Bennetzen, J.L., Kellogg, E.A. Pires, J.C., and P.S. Soltis "The Genomes of All Angiosperms: A Call for a Coordinated Global Census" Journal of Botany , 2011 doi: 10.1155/2011/646198
Givnish, T. J., Ames, M., McNeal, J. R., McKain, M.R., Steele, P. R., dePamphilis, C. W., Graham, S. W., Pires, J. C., Stevenson, D. W., Zomlefer, W. B., Briggs, B. G., Duvall, M. R., Moore, M. J., Heaney, J. M., Soltis, D. E., Soltis, P. S., Thiele, K., "Assembling the tree of the monocotyledons: Plastome sequence phylogeny and evolution of Poales" Annals of the Missouri Botanical Garden , v.97 , 2010 , p.584
Halverson, K.L., Pires, J. C. and S.K Abell "Exploring the complexity of tree thinking expertise in an undergraduate plant systematics course" Science Education , v.95 , 2011 , p.794
Steele, P.R., and J. C. Pires "Biodiversity assessment: state-of-the-art techniques in phylogenomics and species identification" American Journal of Botany , v.98 , 2011 , p.415

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