Award Abstract # 0515152
Frame Toolbox for Bioimaging, Biometrics and Robust Transmission

NSF Org: CCF
Division of Computing and Communication Foundations
Recipient: CARNEGIE MELLON UNIVERSITY
Initial Amendment Date: July 7, 2005
Latest Amendment Date: May 22, 2008
Award Number: 0515152
Award Instrument: Standard Grant
Program Manager: John Cozzens
CCF
 Division of Computing and Communication Foundations
CSE
 Directorate for Computer and Information Science and Engineering
Start Date: September 1, 2005
End Date: August 31, 2008 (Estimated)
Total Intended Award Amount: $0.00
Total Awarded Amount to Date: $305,773.00
Funds Obligated to Date: FY 2005 = $287,773.00
FY 2006 = $6,000.00

FY 2007 = $6,000.00

FY 2008 = $6,000.00
History of Investigator:
  • Jelena Kovacevic (Principal Investigator)
    jelenak@nyu.edu
Recipient Sponsored Research Office: Carnegie-Mellon University
5000 FORBES AVE
PITTSBURGH
PA  US  15213-3815
(412)268-8746
Sponsor Congressional District: 12
Primary Place of Performance: Carnegie-Mellon University
5000 FORBES AVE
PITTSBURGH
PA  US  15213-3815
Primary Place of Performance
Congressional District:
12
Unique Entity Identifier (UEI): U3NKNFLNQ613
Parent UEI: U3NKNFLNQ613
NSF Program(s): SIGNAL PROCESSING SYS PROGRAM
Primary Program Source: app-0105 
app-0106 

app-0107 

01000809DB NSF RESEARCH & RELATED ACTIVIT
Program Reference Code(s): 9218, 9251, HPCC
Program Element Code(s): 472000
Award Agency Code: 4900
Fund Agency Code: 4900
Assistance Listing Number(s): 47.070

ABSTRACT

In the past couple of decades, multiresolution techniques in signal and image processing have revolutionized the field. Most of the multiresolution techniques in use are nonredundant, that is, the underlying mathematical structures used are bases. However, many of today's applications require some redundancy in the system.

The requirement of redundancy requires a mathematical structure more general than bases, termed frames. Although the initial work on frames dates back to the 1950s, frames have become more popular only recently, mostly due to emerging applications requiring tools which provide redundancy. A fair amount of work has already been done on frames; however, their level of maturity is nowhere near that of wavelets. This is about to change as a host of applications requires redundancy offered by frames; the theory needs to follow fast.

This research addresses gaps in the current knowledge and solves some of the open questions in frames. These are related to the characterization of certain classes as well as the construction of a frame toolbox motivated by problems in bioimaging, biometrics and robust transmission. Developing the frame theory to this extent brings frames to the level of maturity of wavelets and significantly expands the multiresolution toolbox.

PUBLICATIONS PRODUCED AS A RESULT OF THIS RESEARCH

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A. Chebira and J. Kovačević "Adaptive multiresolution frame classification of biological and biometric images" Proc. of SPIE Conf. on Wavelet Applications in Signal and Image Processing , 2007
A. Chebira and J. Kovačević "Frames in bioimaging" Proc. CISS , 2008
A. Chebira and J. Kovačević "Lapped tight frame transforms" Proc. IEEE Int. Conf. Acoust., Speech, and Signal Proc., Honolulu, HI , v.III , 2007 , p.857
A. Chebira, J. A. Ozolek, C. A. Castro, W. G. Jenkinson, M. Gore, R. Bhagavatula, I. Khaimovich, S. E. Ormon, C. S. Navara, M. Sukhwani, K. E. Orwig, A. Ben-Yehudah, G. Schatten, G. K. Rohde and J. Kovačević "Multiresolution identification of germ layer components in teratomas derived from human and nonhuman primate embryonic stem cells" Proc. IEEE Intl. Symp. Biomed. Imaging , 2008 , p.979
A. Chebira, L. P. Coelho, A. Sandryhalia, S. Lin, G. W. Jenkinson, J. MacSleyne, C. Hoffman, P. Cuadra, C. Jackson, M. Püschel and J. Kovačević "An Adaptive Multiresolution Approach to Fingerprint Recognition" Proc. IEEE Conf. on Image Proc., San Antonio, TX , v.I , 2007 , p.457
A. Chebira, Y. Barbotin, C. Jackson, T. Merryman, G. Srinivasa, R. F. Murphy and J. Kovačević "A multiresolution approach to automated classification of protein subcellular location images" BMC Bioinformatics , v.8 , 2007
C. A. Hallock, I. Özgüneş, R. Bhagavatula, G. K. Rohde, J. C. Crowley, C. E. Onorato, A. Mavalankar, A. Chebira, C. H. Tan and J. Kovačević "Axonal bouton modeling, detection and distribution analysis for the study of neural circuit organization and plasticity" Proc. IEEE Intl. Symp. Biomed. Imaging , 2008 , p.165
J. Kovačević and A. Chebira "Life beyond bases: The advent of frames (Part I)" IEEE SP Magazine. Feature article. , v.24 , 2007 , p.86
J. Kovačević and A. Chebira "Life beyond bases: The advent of frames (Part II)" IEEE SP Magazine. Feature article. , v.24 , 2007 , p.115
R. A. Kellogg, A. Chebira, A. Goyal, P. A. Cuadra, S. F. Zappe, J. S. Minden and J. Kovačević "Towards an image analysis toolbox for high-throughput Drosophila embryo RNAi screens" Proc. IEEE Intl. Symp. Biomed. Imaging , 2007 , p.288

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