Award Abstract # 2126278
RAPID: COVID-19 Scenario Modeling Hub to harness multiple models for long-term projections and decision support

NSF Org: DEB
Division Of Environmental Biology
Recipient: THE PENNSYLVANIA STATE UNIVERSITY
Initial Amendment Date: April 20, 2021
Latest Amendment Date: April 20, 2021
Award Number: 2126278
Award Instrument: Standard Grant
Program Manager: Andrea Porras-Alfaro
aporrasa@nsf.gov
 (703)292-2944
DEB
 Division Of Environmental Biology
BIO
 Directorate for Biological Sciences
Start Date: May 1, 2021
End Date: April 30, 2024 (Estimated)
Total Intended Award Amount: $200,000.00
Total Awarded Amount to Date: $200,000.00
Funds Obligated to Date: FY 2021 = $200,000.00
History of Investigator:
  • Katriona Shea (Principal Investigator)
Recipient Sponsored Research Office: Pennsylvania State Univ University Park
201 OLD MAIN
UNIVERSITY PARK
PA  US  16802-1503
(814)865-1372
Sponsor Congressional District: 15
Primary Place of Performance: Pennsylvania State Univ University Park
University Park
PA  US  16802-1503
Primary Place of Performance
Congressional District:
15
Unique Entity Identifier (UEI): NPM2J7MSCF61
Parent UEI:
NSF Program(s):
Primary Program Source: 01002021RB NSF RESEARCH & RELATED ACTIVIT
Program Reference Code(s): 7914, 096Z
Program Element Code(s):
Award Agency Code: 4900
Fund Agency Code: 4900
Assistance Listing Number(s): 47.074

ABSTRACT

The ongoing COVID-19 pandemic has been accompanied by many difficult management decisions for policymakers. This project supports the COVID-19 Scenario Modeling Hub, which brings together multiple modeling groups from different scientific backgrounds to help inform decisions about the long-term potential impact of control measures on SARS-CoV-2 infections, hospitalizations, and deaths. By considering projections of these outcomes under different assumptions about the upcoming course of the pandemic, researchers will help inform decisions by providing timely information to government officials and the public to inform response efforts in the United States. The need to consider multiple potential scenarios and involve input from multiple modeling teams is particularly important when the conditions under which the pandemic will continue are uncertain. This includes effects on pathogen transmissibility and disease severity that may accompany novel variants. The environment in which the pathogen spreads also varies greatly in often unpredictable ways, depending on human behavior and interventions, such as social distancing and vaccine administration. Epidemic projections generated from this research will help inform decisions about how to manage COVID-19 interventions under rapidly changing circumstances.

Approaches from decision analysis, expert elicitation, and model aggregation will be used to collect model projections from multiple groups and then synthesize these results into a unified ensemble projection. This synthesis will be particularly useful as timely management decisions need to be made in order to reduce devastating effects on public health while also accounting for uncertainty and limited resources. Updates will be provided directly to stakeholders, such as the United States Centers for Disease Control and the White House COVID-19 Data Team. Progress will also be shared with other interested parties (e.g., the World Health Organization). Visualizations of the individual model projections and the ensemble projection will be made accessible to the public via a web interface and scientific insights will be made accessible through open access publishing. The development of this framework will also benefit future endeavors to quickly establish collaborations across modeling groups to help inform decisions to limit public health and economic burden in the face of other emerging and endemic pathogens.

This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.

PUBLICATIONS PRODUCED AS A RESULT OF THIS RESEARCH

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(Showing: 1 - 10 of 11)
Jung, Sung-mok and Loo, Sara L and Howerton, Emily and Contamin, Lucie and Smith, Claire P and Carcelén, Erica C and Yan, Katie and Bents, Samantha J and Levander, John and Espino, Jessi and Lemaitre, Joseph C and Sato, Koji and McKee, Clifton D and Hill, "Potential impact of annual vaccination with reformulated COVID-19 vaccines: Lessons from the US COVID-19 scenario modeling hub" PLOS Medicine , v.21 , 2024 https://doi.org/10.1371/journal.pmed.1004387 Citation Details
Howerton, Emily and Contamin, Lucie and Mullany, Luke C. and Qin, Michelle and Reich, Nicholas G. and Bents, Samantha and Borchering, Rebecca K. and Jung, Sung-mok and Loo, Sara L. and Smith, Claire P. and Levander, John and Kerr, Jessica and Espino, J. a "Evaluation of the US COVID-19 Scenario Modeling Hub for informing pandemic response under uncertainty" Nature Communications , v.14 , 2023 https://doi.org/10.1038/s41467-023-42680-x Citation Details
Howerton, Emily and Runge, Michael C. and Bogich, Tiffany L. and Borchering, Rebecca K. and Inamine, Hidetoshi and Lessler, Justin and Mullany, Luke C. and Probert, William J. and Smith, Claire P. and Truelove, Shaun and Viboud, Cécile and Shea, Katriona "Context-dependent representation of within- and between-model uncertainty: aggregating probabilistic predictions in infectious disease epidemiology" Journal of The Royal Society Interface , v.20 , 2023 https://doi.org/10.1098/rsif.2022.0659 Citation Details
Loo, Sara L and Howerton, Emily and Contamin, Lucie and Smith, Claire P and Borchering, Rebecca K and Mullany, Luke C and Bents, Samantha and Carcelen, Erica and Jung, Sung-mok and Bogich, Tiffany and van_Panhuis, Willem G and Kerr, Jessica and Espino, Je "The US COVID-19 and Influenza Scenario Modeling Hubs: Delivering long-term projections to guide policy" Epidemics , v.46 , 2024 https://doi.org/10.1016/j.epidem.2023.100738 Citation Details
Wade-Malone, La Keisha and Howerton, Emily and Probert, William JM and Runge, Michael C and Viboud, Cécile and Shea, Katriona "When do we need multiple infectious disease models? Agreement between projection rank and magnitude in a multi-model setting" Epidemics , v.47 , 2024 https://doi.org/10.1016/j.epidem.2024.100767 Citation Details
Smith, Rachel A and Su, Youzhen and Yan, Katie and Shea, Katriona "Vivifying Outbreaks: Investigating the Influence of a Forecast Visual on Risk Perceptions, Time-Urgency, and Behavioral Intentions" Health Communication , 2024 https://doi.org/10.1080/10410236.2024.2395721 Citation Details
Shea, Katriona and Borchering, Rebecca K. and Probert, William J. and Howerton, Emily and Bogich, Tiffany L. and Li, Shou-Li and van Panhuis, Willem G. and Viboud, Cecile and Aguás, Ricardo and Belov, Artur A. and Bhargava, Sanjana H. and Cavany, Sean M. "Multiple models for outbreak decision support in the face of uncertainty" Proceedings of the National Academy of Sciences , v.120 , 2023 https://doi.org/10.1073/pnas.2207537120 Citation Details
Runge, Michael C and Shea, Katriona and Howerton, Emily and Yan, Katie and Hochheiser, Harry and Rosenstrom, Erik and Probert, William JM and Borchering, Rebecca and Marathe, Madhav V and Lewis, Bryan and Venkatramanan, Srinivasan and Truelove, Shaun and "Scenario design for infectious disease projections: Integrating concepts from decision analysis and experimental design" Epidemics , v.47 , 2024 https://doi.org/10.1016/j.epidem.2024.100775 Citation Details
Reich, Nicholas G. and Lessler, Justin and Funk, Sebastian and Viboud, Cecile and Vespignani, Alessandro and Tibshirani, Ryan J. and Shea, Katriona and Schienle, Melanie and Runge, Michael C. and Rosenfeld, Roni and Ray, Evan L. and Niehus, Rene and Johns "Collaborative Hubs: Making the Most of Predictive Epidemic Modeling" American Journal of Public Health , v.112 , 2022 https://doi.org/10.2105/AJPH.2022.306831 Citation Details
Bay, Clara and St-Onge, Guillaume and Davis, Jessica T and Chinazzi, Matteo and Howerton, Emily and Lessler, Justin and Runge, Michael C and Shea, Katriona and Truelove, Shaun and Viboud, Cecile and Vespignani, Alessandro "Ensemble 2 : Scenarios ensembling for communication and performance analysis" Epidemics , v.46 , 2024 https://doi.org/10.1016/j.epidem.2024.100748 Citation Details
Borchering, Rebecca K. and Mullany, Luke C. and Howerton, Emily and Chinazzi, Matteo and Smith, Claire P. and Qin, Michelle and Reich, Nicholas G. and Contamin, Lucie and Levander, John and Kerr, Jessica and Espino, J. and Hochheiser, Harry and Lovett, Ka "Impact of SARS-CoV-2 vaccination of children ages 511 years on COVID-19 disease burden and resilience to new variants in the United States, November 2021March 2022: a multi-model study" The Lancet Regional Health - Americas , v.17 , 2023 https://doi.org/10.1016/j.lana.2022.100398 Citation Details
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PROJECT OUTCOMES REPORT

Disclaimer

This Project Outcomes Report for the General Public is displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed in this Report are those of the PI and do not necessarily reflect the views of the National Science Foundation; NSF has not approved or endorsed its content.

Long-term (multi-month) COVID-19 projections that combine insights from multiple independent models are needed to inform decision-makers, public health experts, and the general public. We help to coordinate the US Scenario Modeling Hub. Our open-door policy solicits state and national projections of future public health outcomes from multiple modeling teams. Our primary value comes from aligning multiple teams on shared questions that are directly informed by close, decision-focused relationships with public health partners.  By coordinating teams' research efforts, outputs from individual models can then be aggregated into an ensemble, which is known to provide more reliable projections. Importantly, by adapting concepts from expert judgment to manage interactions between Hub collaborators, our Hub efforts focus on reducing linguistic uncertainty (e.g., about scenario descriptions) while gaining a fuller expression of scientific uncertainty (e.g., about immunity and transmission of new SARS-CoV-2 variants) and logistical uncertainty (e.g., about vaccine effects on transmission, or on compliance with non-pharmaceutical interventions).  We evaluated multiple projection aggregation methods to identify and develop preferred methods for characterizing uncertainty for risk analysis informing decisions. We also advanced the theory of scenario design, demonstrated the added value of a multi-model ensemble for infectious disease scenario projections, and addressed how many models are really needed for such multi-model efforts to be successful. The original COVID-19 Scenario Modeling Hub has now expanded its efforts to project other respiratory infections, specifically Flu and RSV, and we interact with similar Hub efforts in Europe. We have completed eighteen rounds of COVID-19 scenario projections, four for Flu and one for RSV to date.  Results from the Scenario Modeling Hubs have been presented to multiple local, state and federal end users, and have informed decisions about, for example, the timing and age-targets for vaccines in the USA throughout and since the pandemic. Additionally, results have been posted to our public-facing website.

 


Last Modified: 08/28/2024
Modified by: Katriona Shea

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