Award Abstract # 2027990
RAPID/Collaborative Research: Agent-based Modeling Toward Effective Testing and Contact-tracing During the COVID-19 Pandemic

NSF Org: CMMI
Division of Civil, Mechanical, and Manufacturing Innovation
Recipient: NEW YORK UNIVERSITY
Initial Amendment Date: April 16, 2020
Latest Amendment Date: April 16, 2020
Award Number: 2027990
Award Instrument: Standard Grant
Program Manager: Eva Kanso
CMMI
 Division of Civil, Mechanical, and Manufacturing Innovation
ENG
 Directorate for Engineering
Start Date: May 1, 2020
End Date: April 30, 2023 (Estimated)
Total Intended Award Amount: $161,124.00
Total Awarded Amount to Date: $161,124.00
Funds Obligated to Date: FY 2020 = $161,124.00
History of Investigator:
  • Maurizio Porfiri (Principal Investigator)
    mporfiri@nyu.edu
  • Zhong-Ping Jiang (Co-Principal Investigator)
Recipient Sponsored Research Office: New York University
70 WASHINGTON SQ S
NEW YORK
NY  US  10012-1019
(212)998-2121
Sponsor Congressional District: 10
Primary Place of Performance: New York University
New York
NY  US  10012-1019
Primary Place of Performance
Congressional District:
10
Unique Entity Identifier (UEI): NX9PXMKW5KW8
Parent UEI:
NSF Program(s): COVID-19 Research
Primary Program Source: 010N2021DB R&RA CARES Act DEFC N
Program Reference Code(s): 034E, 096Z, 7914
Program Element Code(s): 158Y00
Award Agency Code: 4900
Fund Agency Code: 4900
Assistance Listing Number(s): 47.041
Note: This Award includes Coronavirus Aid, Relief, and Economic Security (CARES) Act funding.

ABSTRACT

This Rapid Response Research (RAPID) grant will support research that will improve our understanding of the spread of COVID-19 and potential mitigation strategies at the city level, promoting scientific progress and contributing to national health and prosperity. As COVID-19 continues to spread, the effectiveness of different testing strategies and predictive models are brought into question. Testing strategies include the use of drive-through facilities that have found success elsewhere but may prove impractical for elderly and low-income sections of the population, and the use of hospitals, which adds further burden to the healthcare system and may carry the risk of higher contagion. Mathematical models that forecast the spread of the disease are of paramount importance to inform local and global policy makers on the course of action that should be undertaken to mitigate the outbreak and give relief to the population. However, such models are often confounded by the absence of symptoms in early stages, complex mobility patterns, and limited testing resources. This award supports fundamental research toward a mathematical model that will overcome these confounding factors, through advancements in dynamics and control. By explicitly modeling social and mobility constraints, this research will help increase the general well-being of communities and reduce disparities across the population. The model will afford the simulation of critical what-if scenarios and will include the evaluation of different testing policies and mitigation actions, thereby constituting a valuable support to policy makers involved in the containment and eradication of the epidemic. Research outcomes will be presented to the public, including health professionals and authorities to inform public policy in the ongoing crisis.

The research will respond to COVID-19 outbreak in real time through a fine-resolution agent-based and data-driven model that aims at providing unprecedented insight in the spread and potential mitigation strategies of this virus at the city level. The approach will afford thorough what-if analysis on the effectiveness of ongoing and potential mitigation strategies. The agent-based model will include COVID-19 specific features, such as the type and timing of testing, asymptomatic occurrence, and hospitalization stages. The framework will be grounded in publicly available census and geo-referred data from New Rochelle, New York. Social behavior associated with rational and irrational factors will be included in the mobility patterns of the agent-based model at multiple spatial and temporal scales to increase the granularity of the predictions. Network-theoretic and data-driven control strategies will inform enhanced testing protocols involving active trials on the basis of available contact databases collected at testing sites.

This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.

PUBLICATIONS PRODUCED AS A RESULT OF THIS RESEARCH

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(Showing: 1 - 10 of 15)
Behring, Brandon M. and Rizzo, Alessandro and Porfiri, Maurizio "How adherence to public health measures shapes epidemic spreading: A temporal network model" Chaos: An Interdisciplinary Journal of Nonlinear Science , v.31 , 2021 https://doi.org/10.1063/5.0041993 Citation Details
Burbano Lombana, Daniel Alberto and Zino, Lorenzo and Butail, Sachit and Caroppo, Emanuele and Jiang, Zhong-Ping and Rizzo, Alessandro and Porfiri, Maurizio "Activity-driven network modeling and control of the spread of two concurrent epidemic strains" Applied Network Science , v.7 , 2022 https://doi.org/10.1007/s41109-022-00507-6 Citation Details
Butail, Sachit and Porfiri, Maurizio "The Effect of An Emergency Evacuation on the Spread of COVID19" Frontiers in Physics , v.8 , 2021 https://doi.org/10.3389/fphy.2020.631264 Citation Details
Caroppo, Emanuele and De Lellis, Pietro and Lega, Ilaria and Candelori, Antonella and Pedacchia, Daniela and Pellegrini, Alida and Sonnino, Rossella and Venturiello, Virginia and Ruiz Marìn, Manuel and Porfiri, Maurizio "Unequal effects of the national lockdown on mental and social health in Italy" Annali dellIstituto superiore di sanità , v.56 , 2020 https://doi.org/10.4415/ANN_20_04_13 Citation Details
De Lellis, Pietro and Ruiz Marín, Manuel and Porfiri, Maurizio "Quantifying the role of the COVID-19 pandemic in the 2020 U.S. presidential elections" The European Physical Journal Special Topics , 2021 https://doi.org/10.1140/epjs/s11734-021-00299-3 Citation Details
Nadini, Matthieu and Zino, Lorenzo and Rizzo, Alessandro and Porfiri, Maurizio "A multi-agent model to study epidemic spreading and vaccination strategies in an urban-like environment" Applied Network Science , v.5 , 2020 https://doi.org/10.1007/s41109-020-00299-7 Citation Details
Parino, Francesco and Zino, Lorenzo and Porfiri, Maurizio and Rizzo, Alessandro "Modelling and predicting the effect of social distancing and travel restrictions on COVID-19 spreading" Journal of The Royal Society Interface , v.18 , 2021 https://doi.org/10.1098/rsif.2020.0875 Citation Details
Surano, Francesco_Vincenzo and Porfiri, Maurizio and Rizzo, Alessandro "Analysis of lockdown perception in the United States during the COVID-19 pandemic" The European Physical Journal Special Topics , v.231 , 2021 https://doi.org/10.1140/epjs/s11734-021-00265-z Citation Details
Truszkowska, Agnieszka and Behring, Brandon and Hasanyan, Jalil and Zino, Lorenzo and Butail, Sachit and Caroppo, Emanuele and Jiang, ZhongPing and Rizzo, Alessandro and Porfiri, Maurizio "HighResolution AgentBased Modeling of COVID19 Spreading in a Small Town" Advanced Theory and Simulations , v.4 , 2021 https://doi.org/10.1002/adts.202000277 Citation Details
Truszkowska, Agnieszka and Fayed, Maya and Wei, Sihan and Zino, Lorenzo and Butail, Sachit and Caroppo, Emanuele and Jiang, Zhong-Ping and Rizzo, Alessandro and Porfiri, Maurizio "Urban Determinants of COVID-19 Spread: a Comparative Study across Three Cities in New York State" Journal of Urban Health , v.99 , 2022 https://doi.org/10.1007/s11524-022-00623-9 Citation Details
Truszkowska, Agnieszka and Thakore, Malav and Zino, Lorenzo and Butail, Sachit and Caroppo, Emanuele and Jiang, ZhongPing and Rizzo, Alessandro and Porfiri, Maurizio "Designing the Safe Reopening of US Towns Through HighResolution AgentBased Modeling" Advanced Theory and Simulations , v.4 , 2021 https://doi.org/10.1002/adts.202100157 Citation Details
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PROJECT OUTCOMES REPORT

Disclaimer

This Project Outcomes Report for the General Public is displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed in this Report are those of the PI and do not necessarily reflect the views of the National Science Foundation; NSF has not approved or endorsed its content.

In this project, we established a modeling framework to inform the decision-making and policy about testing and active surveillance policies during the COVID-19 outbreak. Our framework comprised a new, highly granular, agent-based COVID-19 modeling platform for performing "what-if" analyses related to the spread and control of COVID-19 pandemic. The open-source agent-based modeling platform included critical features, such as hospital-like and drive-through testing centers, testing effectiveness, mobility between locations, varying capacities, vaccination campaigns, and the existence of multiple strains. The platform was initially calibrated on of the town of New Rochelle, NY, where one of the first cases of COVID-19 were detected in the state, and then it was extended to study other cities of similar size. We continuously upgraded the platform to answer urgent questions that kept arising during the course of the pandemic. For example, as vaccinations reached testing phase, we investigated the effect of different vaccination strategies and the interplay between reopening efforts and vaccination campaigns. When vaccinations had been administered to a majority of the population for a few months, and questions related to immunity were raised, we studied the impact of booster rollouts and testing practices. In parallel, as additional variants emerged, we determined the effect of multiple strains concurrently propagating in the population. The platform was additionally used to investigate the role of urban design and the population structure on the evolution of the epidemic. These studies were complemented by independent analytical and modeling efforts focusing on questions related to the possibility of exposure to COVID-19 during emergency evacuations, correlations between the COVID-19 pandemic and the 2020 U.S. Presidential Elections, understanding of the role of deniers on the spread of an epidemic disease, and in the identification of drivers of rise and fall in infections during waves of infections. Several undergraduate students, graduate students, and postdoctoral fellows contributed to this project as they received training in dynamical systems modeling, time-series analysis, statistical analysis, and epidemiology, among many other disciplines. Findings from this project were disseminated through publications in international journals and presentations in technical meetings.


Last Modified: 05/24/2023
Modified by: Maurizio Porfiri

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