Award Abstract # 1541310
CC*DNI Networking Infrastructure: A Dedicated High-Speed Campus Research Network

NSF Org: OAC
Office of Advanced Cyberinfrastructure (OAC)
Recipient: UNIVERSITY OF ALABAMA AT BIRMINGHAM
Initial Amendment Date: August 12, 2015
Latest Amendment Date: August 12, 2015
Award Number: 1541310
Award Instrument: Standard Grant
Program Manager: Kevin Thompson
kthompso@nsf.gov
 (703)292-4220
OAC
 Office of Advanced Cyberinfrastructure (OAC)
CSE
 Directorate for Computer and Information Science and Engineering
Start Date: January 1, 2016
End Date: December 31, 2017 (Estimated)
Total Intended Award Amount: $498,443.00
Total Awarded Amount to Date: $498,443.00
Funds Obligated to Date: FY 2015 = $498,443.00
History of Investigator:
  • Purushotham Bangalore (Principal Investigator)
    pvbangalore@ua.edu
Recipient Sponsored Research Office: University of Alabama at Birmingham
701 S 20TH STREET
BIRMINGHAM
AL  US  35294-0001
(205)934-5266
Sponsor Congressional District: 07
Primary Place of Performance: University of Alabama at Birmingham
AL  US  35294-0001
Primary Place of Performance
Congressional District:
07
Unique Entity Identifier (UEI): YND4PLMC9AN7
Parent UEI:
NSF Program(s): Campus Cyberinfrastructure
Primary Program Source: 01001516DB NSF RESEARCH & RELATED ACTIVIT
Program Reference Code(s): 9150
Program Element Code(s): 808000
Award Agency Code: 4900
Fund Agency Code: 4900
Assistance Listing Number(s): 47.070

ABSTRACT

In order to accommodate the ever-increasing demand for transferring large amounts of data generated by various instruments and computational simulations, the focus of this project is to develop a dedicated high-speed research network at the University of Alabama at Birmingham (UAB). This networking infrastructure provides researchers at UAB with 10 Gigabits per second (Gbps) connections from selected computers to the shared computational facility. It accelerates campus data transfers at least 10-fold and provides access to 10 Gbps data transfer rates for researchers downloading/uploading large datasets from external data repositories and national computational resources such as XSEDE and Open Science Grid through the campus Internet2 connection. Network performance is monitored using perfSONAR and high-speed data transfer is supported through the use of dedicated data transfer nodes. This infrastructure is also used to explore Software-Defined Networking (SDN) technologies.

This high-speed research network provides researchers and their graduate students with faster access to state-of-the-art cyberinfrastructure, thereby accelerating their research and improving their research productivity. Several important research activities in Biology, Physics, Material Science, Image Analysis, Cloud Computing, and Biomedical Engineering are enabled by this infrastructure and each project offers significant societal impacts in their respective areas of science and engineering. Underlying these efforts are UAB's strong commitments to a diverse student body and faculty, and long-term commitments by individual faculty involved in this project to training, mentoring, and recruiting women and underrepresented groups into science and engineering.

PUBLICATIONS PRODUCED AS A RESULT OF THIS RESEARCH

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Kumar R, Yi N, Zhi D, Eipers P, Goldsmith KT, Dixon P, Crossman DK, Crowley MR, Lefkowitz EJ, Rodriguez JM, Morrow CD "Identification of donor microbe species that colonize and persist long term in the recipient after fecal transplant for recurrent Clostridium difficile" NPJ Biofilms Microbiomes , v.3 , 2017
Miller AL, Garcia PL, Pressey JG, Beierle EA, Kelly DR, Crossman DK, Council LN, Daniel R, Watts RG, Cramer SL, Yoon KJ. "Whole exome sequencing identified sixty-five coding mutations in four neuroblastoma tumors" Sci Rep. , v.7 , 2017

PROJECT OUTCOMES REPORT

Disclaimer

This Project Outcomes Report for the General Public is displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed in this Report are those of the PI and do not necessarily reflect the views of the National Science Foundation; NSF has not approved or endorsed its content.

In order to accommodate the ever-increasing demand for transferring large amounts of data generated by various instruments and computational simulations the focus of this effort was to develop a dedicated high-speed research network at the University of Alabama at Birmingham (UAB). This networking infrastructure provided a high-speed network for several key research groups who have large data transfer requirements between their individual research laboratories and the shared computational facility as well as a faster connection for bulk data transfer to/from data repositories outside UAB through the Internet2 connection by setting up a ScienceDMZ. This infrastructure provided a ten fold improvement in the network bandwidth on campus while providing a "friction-free" pathway to access external data repositories as well as computational resources such as XSEDE and Open Science Grid. Network performance was monitored using perfSonar and high-speed data transfer was supported through the use of dedicated data transfer nodes. This effort also improved the productivity of UAB researchers by reducing the time to transfer large volumes of data from external resources and promote collaboration among researchers from varied disciplines across the campus. The various project that utilized this infrastructure made significant impacts in their respective areas of research such as efficient analysis of next-generation sequencing data to support personalized medicine; novel biomarker for the diagnosis of Parkinson Disease; and novel techniques for neuroimaging and visualization.


Last Modified: 04/05/2018
Modified by: Purushotham Bangalore

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