Award Abstract # 0236093
New Applications for Probe Microscopy of Biomolecular Materials

NSF Org: MCB
Division of Molecular and Cellular Biosciences
Recipient: UNIVERSITY OF CALIFORNIA, SANTA BARBARA
Initial Amendment Date: March 24, 2003
Latest Amendment Date: June 11, 2007
Award Number: 0236093
Award Instrument: Continuing Grant
Program Manager: Kamal Shukla
MCB
 Division of Molecular and Cellular Biosciences
BIO
 Directorate for Biological Sciences
Start Date: May 1, 2003
End Date: April 30, 2008 (Estimated)
Total Intended Award Amount: $0.00
Total Awarded Amount to Date: $567,353.00
Funds Obligated to Date: FY 2003 = $183,496.00
FY 2004 = $186,857.00

FY 2005 = $197,000.00
History of Investigator:
  • Arkadiusz Chworos (Principal Investigator)
    achworos@physics.ucsb.edu
  • Matthew Tirrell (Co-Principal Investigator)
  • Helen Hansma (Former Principal Investigator)
  • Elisabeth Gwinn (Former Principal Investigator)
  • Everett Lipman (Former Principal Investigator)
Recipient Sponsored Research Office: University of California-Santa Barbara
3227 CHEADLE HALL
SANTA BARBARA
CA  US  93106-0001
(805)893-4188
Sponsor Congressional District: 24
Primary Place of Performance: University of California-Santa Barbara
3227 CHEADLE HALL
SANTA BARBARA
CA  US  93106-0001
Primary Place of Performance
Congressional District:
24
Unique Entity Identifier (UEI): G9QBQDH39DF4
Parent UEI:
NSF Program(s): Molecular Biophysics
Primary Program Source: app-0103 
app-0104 

app-0105 
Program Reference Code(s): BIOT, 1164, 9183
Program Element Code(s): 114400
Award Agency Code: 4900
Fund Agency Code: 4900
Assistance Listing Number(s): 47.074

ABSTRACT

The main objective of this research is to develop innovations in probe microscopy of biomolecular materials. The research will integrate both the imaging and the pulling aspects of probe microscopy to develop models of biomolecular mechanics and structures. Specifically, the work will focus on three significant classes of biomolecular materials, and it will examine two types of biomaterials from each class: (1) Highly elastic biological proteins - spider capture silk and HMW (high molecular weight) glutenin -are good model systems for possible improvements in the elasticity of synthetic materials. (2) Protein mimics to be investigated are polyamino acids and a non-peptide triblock copolymer mimic of the abalone protein lustrin; lustrin is the main protein component of abalone shell, which is 3000 times more fracture resistant than concrete. (3) Novel DNA structures to be investigated are telomeric mimics, and DNA-surfactant liquid-crystalline films, which have been used to study photoconductivity of DNA.

This research will take a multi-directional approach to make innovations in probe microscopy of biomolecular materials. Probing many systems has been a good approach for maximizing the probability of innovation in probe microscopy of biomolecular materials. Undergraduate students will be involved in the research, and some will become co-authors or first authors of peer-reviewed publications.

PUBLICATIONS PRODUCED AS A RESULT OF THIS RESEARCH

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(Showing: 1 - 10 of 20)
Becker, N; Oroudjev, E; Mutz, S; Cleveland, JP; Hansma, PK; Hayashi, CY; Makarov, DE; Hansma, HG "Molecular nanosprings in spider capture-silk threads" NATURE MATERIALS , v.2 , 2003 , p.278 View record at Web of Science 10.1038/nmat85
Chworos, A; Severcan, I; Koyfman, AY; Weinkam, P; Oroudjev, E; Hansma, HG; Jaeger, L "Building programmable jigsaw puzzles with RNA" SCIENCE , v.306 , 2004 , p.2068 View record at Web of Science 10.1126/science.110468
Fantner, GE; Oroudjev, E; Schitter, G; Golde, LS; Thurner, P; Finch, MM; Turner, P; Gutsmann, T; Morse, DE; Hansma, H; Hansma, PK "Sacrificial bonds and hidden length: Unraveling molecular mesostructures in tough materials" BIOPHYSICAL JOURNAL , v.90 , 2006 , p.1411 View record at Web of Science 10.1529/biophysj.105.06934
Fogg, JM; Kolmakova, N; Rees, I; Magonov, S; Hansma, H; Perona, JJ; Zechiedrich, EL "Exploring writhe in supercoiled minicircle DNA" JOURNAL OF PHYSICS-CONDENSED MATTER , v.18 , 2006 , p.S145 View record at Web of Science 10.1088/0953-8984/18/14/S0
Gourdon, D; Lin, Q; Oroudjev, E; Hansma, H; Golan, Y; Arad, S; Israelachvili, J "Adhesion and stable low friction provided by a subnanometer-thick monolayer of a natural polysaccharide" LANGMUIR , v.24 , 2008 , p.1534 View record at Web of Science 10.1021/la702259
Hansma, HG; Golan, R; Mateescu, E; Steinberger, R; Holden, PA; Oroudjev, E "Surface biology by atomic force microscopy and molecular pulling" ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY , v.225 , 2003 , p.U609 View record at Web of Science
Hansma, HG; Kasuya, K; Oroudjev, E "Atomic force microscopy imaging and pulling of nucleic acids" CURRENT OPINION IN STRUCTURAL BIOLOGY , v.14 , 2004 , p.380 View record at Web of Science 10.1016/j.sbi.2004.05.00
Hansma, HG; Oroudjev, E; Baudrey, S; Jaeger, L "TectoRNA and 'kissing-loop' RNA: atomic force microscopy of self-assembling RNA structures" JOURNAL OF MICROSCOPY-OXFORD , v.212 , 2003 , p.273 View record at Web of Science
Hansma, HJ; Langenbach, GEJ; Koolstra, JH; Van Eijden, TMGJ "Passive resistance increases differentially in various jaw displacement directions" JOURNAL OF DENTISTRY , v.34 , 2006 , p.491 View record at Web of Science 10.1016/j.jdent.2005.11.00
Hisano, T; Kasuya, KI; Tezuka, Y; Ishii, N; Kobayashi, T; Shiraki, M; Oroudjev, E; Hansma, H; Iwata, T; Doi, Y; Saito, T; Miki, K "The crystal structure of polyhydroxybutyrate depolymerase from Penicillum funiculosum provides insights into the recognition and degradation of biopolyesters" JOURNAL OF MOLECULAR BIOLOGY , v.356 , 2006 , p.993 View record at Web of Science
Koyfman, AY; Chworos, A; Oroudjev, E; Magono, S; Hansma, HG; Jaeger, L "Atomic force microscopy of programmable, self-assembling tecto-RNAS." ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY , v.227 , 2004 , p.U1003 View record at Web of Science
(Showing: 1 - 10 of 20)

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