Award Abstract # 1234305
DMREF: Collaborative Research: Simulation-Based Design of Functional Sub-nanometer Porous Membranes

NSF Org: CBET
Division of Chemical, Bioengineering, Environmental, and Transport Systems
Recipient: NORTHWESTERN UNIVERSITY
Initial Amendment Date: August 22, 2012
Latest Amendment Date: July 15, 2015
Award Number: 1234305
Award Instrument: Standard Grant
Program Manager: Angie Lueking
CBET
 Division of Chemical, Bioengineering, Environmental, and Transport Systems
ENG
 Directorate for Engineering
Start Date: September 1, 2012
End Date: August 31, 2016 (Estimated)
Total Intended Award Amount: $225,053.00
Total Awarded Amount to Date: $237,053.00
Funds Obligated to Date: FY 2012 = $225,053.00
FY 2013 = $6,000.00

FY 2015 = $6,000.00
History of Investigator:
  • Sinan Keten (Principal Investigator)
    s-keten@northwestern.edu
Recipient Sponsored Research Office: Northwestern University
633 CLARK ST
EVANSTON
IL  US  60208-0001
(312)503-7955
Sponsor Congressional District: 09
Primary Place of Performance: Northwestern University
2145 Sheridan Road
Evanston
IL  US  60208-0834
Primary Place of Performance
Congressional District:
09
Unique Entity Identifier (UEI): EXZVPWZBLUE8
Parent UEI:
NSF Program(s): Interfacial Engineering Progra
Primary Program Source: 01001213DB NSF RESEARCH & RELATED ACTIVIT
01001314DB NSF RESEARCH & RELATED ACTIVIT

01001516DB NSF RESEARCH & RELATED ACTIVIT
Program Reference Code(s): 052E, 136E, 7237, 9251
Program Element Code(s): 141700
Award Agency Code: 4900
Fund Agency Code: 4900
Assistance Listing Number(s): 47.041

ABSTRACT

1234305/1235439
PI: Keten/Xu

Polymer thin films containing high-density arrays of nanotubes as through channels are very desirable as environmentally friendly and efficient selective transport systems. However, successful design and synthesis of polymer membranes that can be processed in solution and have precise subnanometer diameter pores, vertical channel alignment, and tunable pore interior chemistry similar to biological transmembrane proteins has remained challenging to produce. This project employs a collaborative theoretical / experimental effort to model, design and synthesize functionalized cyclic peptide nanotubes (CPNs) to understand mechanisms governing their assembly in solution and co-assembly with block copolymers. The objective of this research project is to generate mechanically robust self-assembling peptide nanotubes with functional interiors that could be used in selective porous membranes. To achieve this overarching objective, we will (i) fabricate and characterize porous cyclic peptide nanotubes (CPNs) functionalized with a polar (amine) group, (ii) produce layered membranes with control over the vertical distribution of CPs with polar and non-polar groups using crosslinkable block copolymer matrix, and (iii) investigate selectivity mechanisms in membranes with tunable pore functionalities toward novel transport capabilities. Validated large-scale simulation efforts will be integrated with experiments to rapidly evaluate material design parameters and predict material properties, circumventing challenges associated with purely combinatorial approaches.

This research project aims to break new ground by mapping out the nascent material space of organic nanotubes through simulations. Fresh knowledge pertaining to the underlying physics of peptide/polymer hybrid nanostructures will be foundational for generating novel functional subnanoporous membranes toward new platforms to study molecular mechanisms underpinning key transport phenomena observed in biology. K-12 outreach and undergraduate research programs at Northwestern University and the University of California, Berkeley, respectively, will be leveraged to recruit underrepresented minority students and women into the research team through summer opportunities at both institutions. An image library for organic nanotube materials will be created and will serve as an open-access database for public outreach, and for other researchers to identify broader applications of our functional nanostructures and methods. Modules for virtual and laboratory experiments will be created to promote effective learning in materials physics and chemistry at all levels, and will be contributed to NanoHub and forthcoming cyber infrastructures. Guidance and mentorship on career development as well as work-life balance will be provided for graduate students and postdoctoral fellows through interactions with academia, industry and national labs.

PUBLICATIONS PRODUCED AS A RESULT OF THIS RESEARCH

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(Showing: 1 - 10 of 23)
Alsina, Marco A and Gaillard, Jean-Fran{\c c}ois and Keten, Sinan "Conformational changes during permeation of Na+ through a modified cyclic peptide nanotube promote energy landscape roughness" Physical Chemistry Chemical Physics , v.18 , 2016 , p.31698-317
Benjamin, Ari and Keten, Sinan "Polymer Conjugation as a Strategy for Long-Range Order in Supramolecular Polymers" The Journal of Physical Chemistry B , v.120 , 2016 , p.3425-3433 10.1021/acs.jpcb.5b12547
Brendan AbbertonWing Kam LiuSinan Keten "Coarse-grained Simulation of Molecular Mechanisms of Recovery in Thermally Activated Shape-memory Polymers" Journal of the Mechanics and Physics of Solids , v.61 , 2013 , p.2625 10.1016/j.jmps.2013.08.003
Brendan C. Abberton and Wing Kam Liu and Sinan Keten "Coarse-grained simulation of molecular mechanisms of recovery in thermally activated shape-memory polymers" Journal of the Mechanics and Physics of Solids , v.61 , 2013 , p.2625 - 26 http://dx.doi.org/10.1016/j.jmps.2013.08.003
L Ruiz and P VonAchen and T D Lazzara and T Xu and S Keten "Persistence length and stochastic fragmentation of supramolecular nanotubes under mechanical force" Nanotechnology , v.24 , 2013 , p.195103
L. RuizY. WuS. Keten "Water Transport in Cyclic Peptide Nanotubes with Bioinspired Interior Functionalizations" Nanoscale , v.7 , 2015
Luis RuizPaige vonAchenThomas LazzaraTing XuSinan Keten "Persistence length and stochastic fragmentation of supramolecular nanotubes under mechanical force" Nanotechnology , v.24 , 2013 doi:10.1088/0957-4484/24/19/195103
Luis RuizPaige VonAchenTing XuSinan Keten "Persistence length and stochastic fragmentation of supramolecular nanotubes under mechanical force" Nanotechnology , v.24 , 2013 , p.195103 10.1088/0957-4484/24/19/195103
Luis RuizSinan Keten "Multi-scale Modeling of Elasticity and Fracture in Organic Nanotubes" Journal of Engineering Mechanics , v.140 , 2013 , p.431 10.1061/(ASCE)EM.1943-7889.0000471
Luis RuizSinan Keten "Tuning the assembly of supra-biomolecular nanotubes using entropic springs" Soft Matter , v.10 , 2014 , p.851 10.1039/C3SM52600C
Matthew SullivanSinan Keten "Critical Scales Govern the Mechanical Fragmentation Mechanisms of Biomolecular Assemblies" Journal of Applied Mechanics , v.80 , 2013 , p.061010 10.1115/1.4023681
(Showing: 1 - 10 of 23)

PROJECT OUTCOMES REPORT

Disclaimer

This Project Outcomes Report for the General Public is displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed in this Report are those of the PI and do not necessarily reflect the views of the National Science Foundation; NSF has not approved or endorsed its content.

One of the major challenges in membrane science is to design polymer thin films that self-assemble in solution into continuous, rectilinear pores that are less than a nanometer in dimension and can exhibit a variety of chemical features in the pore lumen in a way that mimics transmembrane proteins in our cells. We aimed to address this issue by synthesizing and characterizing novel polymer-conjugated cyclic peptide nanotubes that are capable of self-assembly in solution or with block copolymers. Towards this goal, we characterized first the mechanical behavior of cyclic peptide nanotubes, which revealed that they are among the most rigid and self-assembling peptide materials known, which makes them favorable for membrane applications. Using simulations as guidance, we designed nanotubes with non-polar and polar groups presented in the lumen, which enabled highly tunable transport properties in homogenous tubes. For example, we found that non-polar functional groups allowed water transport in single file at reasonably high flux while dramatically improving monovalent cation rejection, which is useful for desalination membranes but remained challenging with existing peptide nanotubes. Transport simulations revealed how lumen size, chemistry and conformational dynamics of the nanotubes during ion passage influence flux and rejection properties. We also found that polymer conjugation can be utilized to control the growth of nanotubes, where increasing the number of polymer arms attached can change binding energies. Binary mixtures of cyclic peptides with varying conjugation degree revealed a strategy for stochastically ordering functional groups into striped patterns along the length of the nanotube during self-assembly. These findings pave the way for using simulations to design and synthesize supramolecular nanotubes that have versatile interiors and exterior to make membranes that have superior flux and rejection. These result have changed our fundamental understanding of factors governing transport in polymeric and peptide-based membranes, which is important for improving separation membrane performance in desalination, gas separation, and ion-exchange applications. We anticipate that advancing separation performance through membranes inspired from this work will impact many societal issues ranging from water purification to battery technology. 

This research project provided support for two graduate students, and led to the completion of a Master's Thesis and Doctoral Thesis as well as numerous publications in leading journals in the field. the project involved training of several undergraduate students through REUs and research opportunities, introducing them to scientific research as a first step toward building their careers in STEM fields.  Methods developed and new knowledge gained on transport and self-assembly mechanisms were incorporated into graduate courses. A "Computational Nanodynamics" tool for learning molecular simulations was deposited in the NSF sponsored NanoHUB.org. This tool alllows anyone with access to an internet browser to run state-of-the-art molecular simulations related to self-assembly and other physical phenomena directly related to this research. 

 


Last Modified: 01/30/2017
Modified by: Sinan Keten

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