Award Abstract # 1458402
ABI Development: The Electronic Transponder Analysis Gateway (ETAG): An Animal Behavior Observatory

NSF Org: DBI
Division of Biological Infrastructure
Recipient: UNIVERSITY OF OKLAHOMA
Initial Amendment Date: June 12, 2015
Latest Amendment Date: February 14, 2018
Award Number: 1458402
Award Instrument: Standard Grant
Program Manager: Peter McCartney
DBI
 Division of Biological Infrastructure
BIO
 Directorate for Biological Sciences
Start Date: June 15, 2015
End Date: May 31, 2020 (Estimated)
Total Intended Award Amount: $314,890.00
Total Awarded Amount to Date: $314,890.00
Funds Obligated to Date: FY 2015 = $314,890.00
History of Investigator:
  • Claire Curry (Principal Investigator)
    cmcurry@ou.edu
  • Eli Bridge (Co-Principal Investigator)
  • Jessica Ruyle (Co-Principal Investigator)
  • Jonah Duckles (Former Principal Investigator)
  • Mark Stacy (Former Principal Investigator)
Recipient Sponsored Research Office: University of Oklahoma Norman Campus
660 PARRINGTON OVAL RM 301
NORMAN
OK  US  73019-3003
(405)325-4757
Sponsor Congressional District: 04
Primary Place of Performance: University of Oklahoma Norman Campus
101 David L Boren Blvd
Norman
OK  US  73019-5300
Primary Place of Performance
Congressional District:
04
Unique Entity Identifier (UEI): EVTSTTLCEWS5
Parent UEI:
NSF Program(s): ADVANCES IN BIO INFORMATICS,
EPSCoR Co-Funding
Primary Program Source: 01001516DB NSF RESEARCH & RELATED ACTIVIT
Program Reference Code(s): 9150
Program Element Code(s): 116500, 915000
Award Agency Code: 4900
Fund Agency Code: 4900
Assistance Listing Number(s): 47.074

ABSTRACT

The Electronic Transponder Analysis Gateway (ETAG) is a software system enabling a biological observatory by providing professional data management and versatile data dissemination to a growing community of researchers who use Radio Frequency Identification (RFID) technology to better understand animal behavior. RFID allows for short-range wireless communication between small transponder tags and readers, and it can facilitate tracking of individual items or animals that are equipped with a tag. RFID is a mature and ubiquitous technology, familiar to people in the form of "microchip" tags implanted in cats and dogs. A community of researchers has emerged that employs RFID to track individual birds, mammals, fish, reptiles, and even insects in a wide range of field and laboratory research endeavors. For the majority of these projects, data collection, analysis, and curation are currently done by hand, which requires individual investigators to spend considerable time on data management rather than science. ETAG will transform the practices of its user community, by creating a common infrastructure based on open-source tools that will allow scientists to collect, validate, visualize, analyze, and share data and metadata in near real-time. As a result, researchers will have new capacities both for producing novel science and for sharing their work with their peers and the general public. The capacity to follow the activities of individual animals at feeding stations and nests is a powerful gateway to conversations about Science, Technology, Engineering, and Math (STEM). ETAG will provide new avenues for researchers to showcase their work and share it with the public through websites and social networking, featuring real-time updates from activities in the field.

The purpose of the ETAG project is to generate informatics infrastructure for RFID-based research, and to equip the emerging user community with resources that let them get the most from their data both in terms of generating new science and performing public outreach and education. ETAG will serve as a data upload portal, a professionally curated database, and a multifaceted dissemination portal for RFID data and will also facilitate the exchange of technical information about hardware, experimental approaches, protocols, and data analysis software produced by the user community. ETAG is part of a broader initiative that will make low-cost, highly versatile RFID equipment available to the scientific community. Already, more than 50 research groups in 19 countries have employed RFID systems designed by the ETAG team to carry out data collection in field and lab settings. Improved hardware and software resources will spur even wider adoption of RFID technologies by biologists and educators. With system support for real time data exchange, ETAG will allow these users to monitor their field or lab studies remotely and respond rapidly to emerging developments or problems. In addition, a common set of Internet-based tools will make it possible for teams of biologists and/or citizen scientists to undertake studies at a continental scale with concomitant data collection at networks of field sites. Finally, the software design documents and code will all be open source, allowing scientists to form alliances with a range of engineers, web designers, and IT specialists who will help add to and maintain the ETAG infrastructure. Progress and outcomes of the project can be tracked at http://etag.animalmigration.org.

PUBLICATIONS PRODUCED AS A RESULT OF THIS RESEARCH

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Bridge ES, Wilhelm J, Pandit MM, Moreno A, Curry CM, Pearson TD, Proppe DS, Holwerda C, Eadie JM, Stair TF, Olson AC, Lyon BE, Branch CL, Pitera AM, Koslovsky D, Sonnenberg BR, Pravosudov VV, Ruyle JE "An Arduino-based RFID Platform for Animal Research" Frontiers in Ecology and Evolution , v.7 , 2019 , p.257 10.3389/fevo.2019.00257
Croston R, D. Y. Kozlovsky, C. L. Branch, T. L. Parchman, E. S. Bridge, V. V. Pravosudov "Individual variation in spatial memory performance in wild mountain chickadees from different elevations" Behavioral Ecology , v.111 , 2015 , p.225 10.1016/j.anbehav.2015.10.015
Croston, RebeccaBranch, Carrie L.Pitera, AngelaKozlovsky, Dovid Y.Bridge, Eli S.Parchman, Thomas L.Pravosudov, Vladimir V. "Predictably harsh environment is associated with reduced cognitive flexibility in food-caching mountain chickadees" Proceedings of the Royal Society B , 2017
Curry CM, Brisay PGD, Rosa P, Koper N "Noise source and individual physiology mediate effectiveness of bird songs adjusted to anthropogenic noise" Scientific Reports , 2018 10.1038/s41598-018-22253-5
Curry CM, Patten MA "Complex spatiotemporal variation in processes shaping song variation" Behaviour , 2019 10.1163/1568539X-00003556
Curry CM, Ross JD, Contina AJ, Bridge ES "Varying dataset resolution alters predictive accuracy of spatially explicit ensemble models for avian species distribution" Ecology and Evolution , v.8 , 2018 , p.12867 10.1002/ece3.4725
Douglas D Gaffin, Claire M Curry. "Arachnid navigationa review of classic and emerging models" Journal of Arachnology , v.48 , 2020 , p.1

PROJECT OUTCOMES REPORT

Disclaimer

This Project Outcomes Report for the General Public is displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed in this Report are those of the PI and do not necessarily reflect the views of the National Science Foundation; NSF has not approved or endorsed its content.

RFID technology may be familiar to many people as the pet microchips or electronic toll booths   This technology is great for researchers to track individual birds, mammals, reptiles, fish, and even insects in field and laboratory research.  ETAG is a data management tool to help animal behavior researchers and institutions such as schools and zoos archive and explore animal behavior data collected using the ubiquitous RFID communication technology.  The user-friendly ETAG interface provides a centralized hub for sharing analyses, forging new collaborations, and contributing tips for effective field implementations of RFID equipment. By creating and promoting this system we are providing tools that facilitate data management for scientists using RFID; increasing the accessibility and utility of RFID technology to the scientific community; and extending this science and technology to reach a broader community of museums, environmental centers, zoological parks, schools, and interested citizens so they can become actively involved in basic biological inquiry and conservation science.  These three key goals of creating a user-friendly interface to accept and explore RFID data were achieved.  We have received positive feedback from researchers and staff at public outreach institutions such as zoological parks and at research institutions wanting to use the new interface.


Last Modified: 08/28/2020
Modified by: Claire Curry

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