Award Abstract # 1443037
CIF21 DIBBs: Collaborative Research: Cyberinfrastructure for Interpreting and Archiving U-series Geochronologic Data

NSF Org: OAC
Office of Advanced Cyberinfrastructure (OAC)
Recipient: COLLEGE OF CHARLESTON
Initial Amendment Date: August 25, 2014
Latest Amendment Date: August 25, 2014
Award Number: 1443037
Award Instrument: Standard Grant
Program Manager: Amy Walton
awalton@nsf.gov
 (703)292-4538
OAC
 Office of Advanced Cyberinfrastructure (OAC)
CSE
 Directorate for Computer and Information Science and Engineering
Start Date: September 1, 2014
End Date: August 31, 2019 (Estimated)
Total Intended Award Amount: $579,762.00
Total Awarded Amount to Date: $579,762.00
Funds Obligated to Date: FY 2014 = $579,762.00
History of Investigator:
  • James Bowring (Principal Investigator)
    bowringj@cofc.edu
Recipient Sponsored Research Office: College of Charleston
66 GEORGE ST
CHARLESTON
SC  US  29424-0001
(843)953-4973
Sponsor Congressional District: 06
Primary Place of Performance: College of Charleston
66 George Street
Charleston
SC  US  29424-0001
Primary Place of Performance
Congressional District:
06
Unique Entity Identifier (UEI): SWV9EK5S9BX5
Parent UEI: WQBBJ8B941M5
NSF Program(s): Paleoclimate,
Petrology and Geochemistry,
Marine Geology and Geophysics,
Data Cyberinfrastructure,
EarthCube,
EPSCoR Co-Funding
Primary Program Source: 01001415DB NSF RESEARCH & RELATED ACTIVIT
Program Reference Code(s): 4444, 7433, 8048, 9150
Program Element Code(s): 153000, 157300, 162000, 772600, 807400, 915000
Award Agency Code: 4900
Fund Agency Code: 4900
Assistance Listing Number(s): 47.070

ABSTRACT

Uranium-series geochronology plays a critical role in understanding the time-scales and rates of climate change, sea-level change, and volcanic activity. There are no standardized data-handling protocols or community-based open data archives for raw isotopic data and reduced results. The U-series geochronology community wants to change this and is encouraged by NSF's vision for 21st century cyberinfrastructure. In this pilot demonstration project, software engineers and geochronologists collaborate to build open-source cyberinfrastructure that standardizes and facilitates U-series data analysis, reporting, and archiving and analysis and re-processing of the vast amounts of legacy data. The project uses the NSF-funded EarthChem-Geochron data repository that archives results from many dating schemes, stimulating inter-domain sharing and discovery. This cyberinfrastructure supports teaching and training at all levels and provides non-experts access to new knowledge.

This collaborative effort applies modern software engineering practices to solving the cyberinfrastructure problems of the U-series geochronology community, making the calculation, archiving, access, and interpretation activities of U-series geochronology as rigorous, seamless, and simple as possible. Currently, isotopic dates from U-series data are calculated and analyzed using legacy, platform-dependent software, and dates are difficult to synthesize because they have been published with disparate decay constants and reporting norms. This pilot project includes new software to calculate, visualize, and interpret U-series dates from new and legacy data, and new schema for data archiving at Geochron.org. Importantly, this project advances the sustainability of NSF's software ecosystem by building upon the cyberinfrastructure architecture already developed for the U-Pb geochronology community under the EARTHTIME umbrella.

PUBLICATIONS PRODUCED AS A RESULT OF THIS RESEARCH

Note:  When clicking on a Digital Object Identifier (DOI) number, you will be taken to an external site maintained by the publisher. Some full text articles may not yet be available without a charge during the embargo (administrative interval).

Some links on this page may take you to non-federal websites. Their policies may differ from this site.

A. DuttonK. RubinN. McLeanJ. BowringE. BardR.L. Edwards G.M. HendersonM.R. ReidD.A. RichardsK.W.W. SimsJ.D. WalkerY. Yokoyama "Data reporting standards for publication of U-series data for geochronology and timescale assessment in the earth sciences" Quaternary Geochronology , v.39 , 2017 , p.142 http://dx.doi.org/10.1016/j.quageo.2017.03.001
Fiona D. Hibbert, Eelco J. Rohling, Andrea Dutton, Felicity H. Williams, Peter M. Chutcharavan, Cheng Zhao, Mark E. Tamisiea "Coral indicators of past sea-level change: A global repository of U-series dated benchmarks" Quaternary Science Reviews , v.145 , 2016 , p.1 0277-3791
P. M. Chutcharavan,A. Dutton, M. J. Ellwood "Seawater 234 U/ 238 U recorded by modern and fossil corals" Geochimica et Cosmochimica Acta , v.224 , 2018 , p.1

PROJECT OUTCOMES REPORT

Disclaimer

This Project Outcomes Report for the General Public is displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed in this Report are those of the PI and do not necessarily reflect the views of the National Science Foundation; NSF has not approved or endorsed its content.

Determining the ages of ancient materials like rock, coral, and shells is an important part of how geoscientists study the earth, providing information on a wide variety of processes, such as how fast sea level rises and falls over ice-age cycles and how frequently volcanoes erupt. One common method for determining how the age of natural materials is called U-series dating, which involves natural radioactivity in rocks of Th and U isotopes; the method is commonly applied to materials that are the 1000 to 500,000 years old.  The collection and interpretation of U-series data in such studies has in the past been impacted by a variety of factors, such as how the data are processed, the  estimation and propagation of uncertainty, and  the radioactive decay calculations, all of which are handled differently in lab groups around the world, which in turn contributes to a scatter and variability in interpretations made from data sets collected in different labs.

This primary goal of this DIBBs Pilot Demonstration project was to develop software to modernize the management and interpretation of U-series data, and develop a community of practice around its use. Our goal has been to make the calculation, archiving, community access, and interpretation of U-series geochronology data in the earth and ocean sciences as rigorous, seamless, and simple as possible, and to make the data resulting from such studies findable, accessible, interoperable and reusable ("FAIR").

This DIBBs award was conducted as a collaborative effort that extended existing software called "ET_Redux" to allow it to work with U-series data (it was originally developed to work with other isotope systems). The newly-extended "ET_Redux" software package resulting from this DIBBs award now provides tools to calculate, visualize, and interpret U-series dates from user-input and legacy data, and tools to ingest new and existing data into an established geochronology archive, Geochron.org, that previously did not include U-series data.  This database environment will allow the public and other scientists to freely find and access  U-series geochronology results that it houses, making the data of prior and future projects easier to find and reuse.

The project demonstrated the successful collaboration between software engineers and earth scientists by exposing, refining, and encoding the U-series geochronology analysis workflow, mathematics, and dataflow occurring after initial data acquisition and reduction. We hope that the resulting software will become a "gold-standard" that provides a seamless transition from analysis, to publication, to archiving which, when combined with other dating schemes supported by Geochron.org, will enhance the quality and breadth of results arising from queries into the database by researchers. These capabilities are needed to exploit both legacy data and the large volume of new U-series data presently being acquired.  Perhaps in the future the effort will be further expanded to encode the full data collection workflow from mass spectrometer to archived results, to even more completely record and make discoverable the process of U-series geochronology.

In addition to the software, this project orchestrated the publishing of an important paper on reporting standards: "Data reporting standards for publication of U-series data for geochronology and timescale assessment in the earth sciences", at:  https://www.sciencedirect.com/science/article/pii/S1871101416301479

The software, "ET_Redux", is available at the open-source repository: https://github.com/CIRDLES/ET_Redux

 


Last Modified: 12/01/2019
Modified by: James F Bowring

Please report errors in award information by writing to: awardsearch@nsf.gov.

Print this page

Back to Top of page