Award Abstract # 1416571
International Collaboration in Chemistry: CDS&E: Multiscale Simulations of Bifunctional Catalysis

NSF Org: CHE
Division Of Chemistry
Recipient: UNIVERSITY OF CALIFORNIA, SAN DIEGO
Initial Amendment Date: January 2, 2015
Latest Amendment Date: January 2, 2015
Award Number: 1416571
Award Instrument: Standard Grant
Program Manager: Evelyn Goldfield
CHE
 Division Of Chemistry
MPS
 Directorate for Mathematical and Physical Sciences
Start Date: January 15, 2015
End Date: December 31, 2019 (Estimated)
Total Intended Award Amount: $299,205.00
Total Awarded Amount to Date: $299,205.00
Funds Obligated to Date: FY 2015 = $299,205.00
History of Investigator:
  • Andreas Goetz (Principal Investigator)
    awgoetz@ucsd.edu
Recipient Sponsored Research Office: University of California-San Diego
9500 GILMAN DR
LA JOLLA
CA  US  92093-0021
(858)534-4896
Sponsor Congressional District: 50
Primary Place of Performance: University of California-San Diego
9500 Gilman Drive
La Jolla
CA  US  92093-0934
Primary Place of Performance
Congressional District:
50
Unique Entity Identifier (UEI): UYTTZT6G9DT1
Parent UEI:
NSF Program(s): Chem Thry, Mdls & Cmptnl Mthds,
CDS&E
Primary Program Source: 01001516DB NSF RESEARCH & RELATED ACTIVIT
Program Reference Code(s): 7433, 8008, 8084, 8396, 8609, 8650, 8676, 9263
Program Element Code(s): 688100, 808400
Award Agency Code: 4900
Fund Agency Code: 4900
Assistance Listing Number(s): 47.049

ABSTRACT

Andreas W Goetz of the University of California, San Diego and Dionisios G Vlachos of the University of Delaware are supported by an award from the Chemical Theory, Models and Computational Methods (CTMC) program and the Computational and Data-Enabled Science and Engineering (CDS&E) program in the Chemistry Division. The Division of Advanced Cyberinfrastructure (ACI) is co-funding this award. Goetz and Vlachos develop and apply computational tools for bifunctional catalysis. The project is an international collaboration with Philippe Sautet, Paul Fleurat-Lessard and Carine Michel of the Ecole Normale Superieure de Lyon in France who provide complimentary expertise and who are supported by a corresponding award of the French ANR. This project develops computational models and software capable of handling the multiscale nature and the complexity inherent to the catalytic processes entailing bifunctional catalysts in solution phase. Bifunctional catalysts are important for the conversion of biomass into liquid fuels and chemicals and therefore for a sustainable future that does not rely on dwindling petroleum sources and minimizes global warming with significant societal impact. Computer simulations can play a key role in understanding how these catalysts function and in guiding development of improved catalysts and industrially viable processes. The computational methods developed are integrated into freely available open source software libraries and distributed with a widely used molecular simulation package. Both graduate and undergraduate students are involved in the project, as well as high school students and teachers via internships and research experience programs to train the next generation of scientists. The work has relevance for multiple domains ranging from chemistry to chemical engineering to biosciences and aids the development of biorefineries with a clear impetus on economic growth and reduced CO2 emissions.


The developments in this project encompass a new force field and linear energy relations for fast screening of catalytic reaction networks, microkinetic simulations to extract the kinetically important steps, molecular dynamics simulations with quantum mechanics/molecular mechanics (QM/MM) algorithms that allow an adaptive exchange of particles across the QM/MM boundary to determine the activation energies of the important reactions, and parameterizations of density functional tight binding theory to maximize the accessible time scales. The combination of these methods enables for the first time to explore the combinatorial explosion in pathways in the transformation of biomass using bifunctional (a metal and an acid/base) catalysts in solution. Initially the project focuses on the hydrodeoxygenation of glycerol into propanediol, for which significant experimental data is available. These simulations aid in the development of improved bifunctional catalysts that can ultimately lead to improved processes in biorefineries. The integration of efficient multi-scale simulation approaches in widely utilized and freely available open source software as part of this project can impact multiple application domains.

PUBLICATIONS PRODUCED AS A RESULT OF THIS RESEARCH

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A. W. Götz, J. I. Rodríguez, F. L. Castillo-Alvarado, D. E. Trujillo-González "Van der Waals effects on structure and optical properties in organic photovoltaics." International Journal of Quantum Chemistry , v.119 , 2019 , p.e25883 10.1002/qua.25883
Gregory R Medders,Andreas W Götz,Miguel A Morales,Pushp Bajaj,Francesco Paesani "On the representation of many-body interactions in water" The Journal of Chemical Physics , v.143 , 2015 , p.104102 10.1063/1.4930194
J. S. M. Anderson, J. I. Rodríguez, P. Ayers, D. E. Trujillo-González, A. W. Götz, J. Autschbach, F. L. Castillo-Alvarado, K. Yamashita "Molecular QTAIM topology is sensitive to relativistic corrections." Chemistry - A European Journal , v.25 , 2019 , p.2538 10.1002/chem.201804464
S. N. Steinmann, P. Fleurat-Lessard, A. W. Götz, C. Michel, R. Ferreira de Morais, P. Sautet "Molecular mechanics models for the image charge, a comment on "Including image charge effects in the molecular dynamics simulations of molecules on metal surfaces?" Journal of Computational Chemistry , v.38 , 2017 , p.2127 10.1002/jcc.24861
S. Steinmann, R. Ferreira de Morais, A. W. Götz, P. Fleurat-Lessard, M. Iannuzzi, P. Sautet, C. Michel "A force field for water over Pt(111): Development, assessment and comparison" Journal of Chemical Theory and Computation , v.14 , 2018 , p.3238 10.1021/acs.jctc.7b01177
T. Pirojsirikul, A. W. Götz, J. Weare, R. C. Walker, K. Kowalski, M. Valiev "Combined quantum-mechanical molecular mechanics calculations with NWChem and AMBER: Excited state properties of green fluorescent protein chromophore in aqueous solution" Journal of Computational Chemistry , v.38 , 2017 , p.1631 10.1002/jcc.24804

PROJECT OUTCOMES REPORT

Disclaimer

This Project Outcomes Report for the General Public is displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed in this Report are those of the PI and do not necessarily reflect the views of the National Science Foundation; NSF has not approved or endorsed its content.

A detailed understanding of chemical processes taking place at solvated metal surfaces is key to the design of improved heterogeneous catalysts for the conversion of biomass into valuable liquid fuels and chemicals. Within this context, this project has developed methods and software for computer simulations of fundamental chemical processes at metal surfaces in aqueous solvent. A classical force field was developed that enables the atomistic description of the structuring of water at a platinum surface. In combination with a new hybrid quantum-mechanical / classical molecular-mechanical approach, this force field enables the computational prediction of solvent effects on substrate adsorption thermochemistry at the metal surface. Furthermore, improved density functional tight binding quantum-mechanical approaches for hybrid quantum / classical simulations in condensed phase have been developed. These computational methods are valuable for designing new catalysts with higher activity and selectivity than the currently known catalysts. Metal surfaces and solvent effects are relevant for many other processes, for instance corrosion and electrochemical energy storage. The availability of improved simulation technologies will help advance these disciplines.  

The methods and data developed in this project have been published in the scientific literature and the software has been integrated into a widely used, freely available, open source molecular simulation package, and thus been made widely available to the scientific community in a sustainable fashion. The scientific results have been presented at various national and international conferences and workshops. As part of this work a symposium was organized at the American Chemical Society Spring National Meeting in 2016 that brought together and informed international experts in the field of computational catalysis. 

This project has included the training and education of several young scientists ranging from high school students to postdoctoral research scholars as part of the future workforce in computational sciences. Specific aspects of the training involved sustainable software engineering practices, parallel programming for modern hardware, high-performance computing, development of new algorithms for molecular simulations, broader aspects of theoretical and computational chemistry, as well as best practices in communicating research results to experts and the broader public. Such education is important to maintain a competitive edge in a world that is increasingly driven by computational and technological advancements.


Last Modified: 07/21/2020
Modified by: Andreas W Goetz

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